Gene Slin_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0008 
Symbol 
ID8723736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8242 
End bp9033 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384881 
Protein GI284034951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000051301 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TACTAATTAG CATCGGTATT TTATCTGCTC TAAGCATGGG CTTTGTGGCT 
ATGAATGCCT ATCGTCGTGT GCACAATACC AGTTTTGGTC CGGGCGAGCA CCTGGAATAT
CGGGTACACT ATGGCTTTAT CAACGCAGCC GAAGCTGTTG TCGATGTAAG TCCTACGCTC
TACAAAGTCA ATGAGCGCCC CTGTTATCGG GTCAACGTCG ACGCCCGGAC GCTGGGGGCC
TTTGATCTTG TGACGCGCAT CCGGGATACC TGGCGGTCGT ACATCGATAC CTCGGCTATT
CTGCCGCAGA AATTTTATAC CAACCTTCAG GAAAACAGTT ACCGTAAGGA AGAAAACATT
ACGTTCAACC ACGAAGCGAA CACGGTGAAA GCTGAAGAGC GCACCGAGAA GGACATTTTT
AAAGTGCCCG ATAATGTGCA CGACCTGATC AGCGGCTACT ACTTCCTGCG CACTATTGAT
TTCAGTAAAC TAAGCAGCGG ACAGGTCATT GAAGTCCCGG CTTTTTACGA CGATACTGTC
TATAACATGA AGGTGCGCTA CCGGGGCAAA GACGTTGTGA AGACAAAGCA GGGCAAGATC
AATGTCATCA AGCTAAACCC GGTTCTGCCG CAGAATAAAC TCATCAAGGA AGAAGAATCC
ATCCGGATTT TCGTTTCCGA CGACGCGAAC AAGGTACCCA TTAAGGTAGA AGTCGACTTT
TTTGTCGGCT CCATGGAAAT GGACCTCAAA CGCGATGGGG GTTTGAAACA GCCGTTGCGC
TATTATAAGT AG
 
Protein sequence
MKKLLISIGI LSALSMGFVA MNAYRRVHNT SFGPGEHLEY RVHYGFINAA EAVVDVSPTL 
YKVNERPCYR VNVDARTLGA FDLVTRIRDT WRSYIDTSAI LPQKFYTNLQ ENSYRKEENI
TFNHEANTVK AEERTEKDIF KVPDNVHDLI SGYYFLRTID FSKLSSGQVI EVPAFYDDTV
YNMKVRYRGK DVVKTKQGKI NVIKLNPVLP QNKLIKEEES IRIFVSDDAN KVPIKVEVDF
FVGSMEMDLK RDGGLKQPLR YYK