Gene Slin_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0006 
Symbol 
ID8723734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6752 
End bp7306 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384879 
Protein GI284034949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000384761 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGTAA AGGAGGCTCC TTTGCAATTT GCGAGCCCAG TATTCAACTG CGCAACGGGG 
CAACTTACTC TTCGCACAAC GGGAGGTAAT GGTCAGCCCG TCGAGTATCA GATTCCGACT
TTAAGTCAGG GCTGGACGAC CACGAATCAA TTTCTGATTA CGGCAAAACA GGCCAAAAAG
GGGTTGAAGT TAAATGCCCG TCAGCGCCGG GGATCAGATA TGGGCTTCGA TAAGGCTGAC
CTGGATTACG ATGTGCCGTC GTGTCCGGGT GCCCGTATGG CTACTGAGAC CGAACCCGTG
AGTGAGTTAA CGGTAAGCGT GTTGGGCAAT CCGGTAGAAG GGAAAACCGT CATTGTGGAG
ATCCGGGGCG CAGAAGGCTT CCCACTGCAT ATGCAATTAA CCGACATAAC CGGTCGGCTC
ATTACCGAGC AGACGATTGA ACGGGCTGCT TCGGTTGAGA TACCCCGGCT GCTATTGGAC
GACCGCACCT CCGGCATGCT GCTGCTTCAG GTCAATACAC CGCTTAAGAG TAAGAGCCTG
TTTAAAAATG CTTGA
 
Protein sequence
MVVKEAPLQF ASPVFNCATG QLTLRTTGGN GQPVEYQIPT LSQGWTTTNQ FLITAKQAKK 
GLKLNARQRR GSDMGFDKAD LDYDVPSCPG ARMATETEPV SELTVSVLGN PVEGKTVIVE
IRGAEGFPLH MQLTDITGRL ITEQTIERAA SVEIPRLLLD DRTSGMLLLQ VNTPLKSKSL
FKNA