| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0004 |
|---|
| Symbol | |
|---|
| ID | 8723732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3527 |
|---|
| End bp | 4132 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003384877 |
|---|
| Protein GI | 284034947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000040409 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCGT CATTGCCTAC ATTCGTCGTT CAGTTAAAAA ACGTTATGAA AAAAGTATCC
TTTTTACTGC TCTTTCTGGC CATAACAGCC AATGCGATTG GGCAATCCTT CTTTACCCCG
CCAAAGCGAA TATCGGGTTA CGTCAATATC AGTGAGTTTG GGTACGCGCC CAGCATCGAC
GGGCGCGCCG GGGCAATTAC CGTTTCAACG GTTAATGGCT ACAAACCGAA CGATCACTTC
TCGGCAGGCC TGGGCGTTTC TTATGTACGT TTCAGTACGG GCTCTACCAA TATCGTCAAT
TTCATGCCGA TCTTCGCTGA TGTACGGGCT TATATCGGAG GTCGAACGGC CCTGATGCTG
GTGGGCGATA TTGGTTACGG TCTGCTGCTC GACAAGGTCA AAACGAGCTA CACCAGCAGC
AAGGGAGATT TATACATCAA TCCGGCCATT GGCATTCGCA CCTACGTGGC CGAAAAATCG
GCGCTTGTGC TGAGCGTTGG TTATTTGTCG CAGTATGTCC TTAATCGGGC CGACTACAAT
GGGGACCGGT ACAACAGCTC TGAACATTCT GACAATGTGA GTGTCAAACT CGGGTTTCTT
TTTTAA
|
|---|
| Protein sequence | MLASLPTFVV QLKNVMKKVS FLLLFLAITA NAIGQSFFTP PKRISGYVNI SEFGYAPSID
GRAGAITVST VNGYKPNDHF SAGLGVSYVR FSTGSTNIVN FMPIFADVRA YIGGRTALML
VGDIGYGLLL DKVKTSYTSS KGDLYINPAI GIRTYVAEKS ALVLSVGYLS QYVLNRADYN
GDRYNSSEHS DNVSVKLGFL F
|
|---|
| |