| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1341 |
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| Symbol | |
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| ID | 8709811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1603811 |
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| End bp | 1604650 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483426 |
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| Product | phospholipase/carboxylesterase |
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| Protein accession | YP_003374524 |
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| Protein GI | 283783770 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0400] Predicted esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.226633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAACTGC AATGCAAAAA AGTGCGAGTA TTGTACAAAC TTTTATTTAT TACAAGCGAC
GGTGATGTAA TGAACACTAA CGATGAACTA AATATCAATA ATGTAGGTGA CAATTCTTAC
GATCCACATA TTGGTCGCGA ATCTCACGTT GTGCCGGGTC GTTTTGGTGA GCCTTTAAAA
GTTATGAATG CACAGTATTC GCAAGGGAAT GCTTCAGCTC ATCCAACGCA TCCGCTGCTT
TTGCTCCTTC ACGGTTGGGG TTCTAACGAG GAAGATTTAT TGGATTTGTT GCGAGTAGTT
GCACCATATA ATGATGCAAT CGCTTTACGT GCTCCACTTA AGCTGGCAGA AGGCGCTTAC
AGTTGGTTCC ACGATGCTGT GCCGCAGCGA GAAGATTTAG ATTACGATAT GTATGCTGCT
GCTGTAGCAA TTGACGAATG GGTGCATGAA AATATTCCAG CGAATCGCGA CATTGTGCCA
TTTGGTTTTT CGCAAGGCGC TGCGCTCGCG GTGCACGTTT TGCGTTTGAA TCCTTCGCGC
TACCGTGCGG CCGTTTCGCT TTCCGGGTTC ATAGCGCCTA GTGTTCCTGC TTCCTCGGAA
GAAATCGCAT TACAAGATAA CGATTTAGCT GAGCGTAATA CTCCTGTATT TTTCGGCTAC
GGATTAGAGG ATGGCGTGAT TCCTCCTTAC GAATTCTCGG CTGCTGCAGC GTGGCTTGAG
GAGCACACTT GGCTTGAAGA ACGTCGTTAT CGCGGGTTGG ATCACGCTGT TGATATGAAC
GAAATTGGCG ATATTCGCAA GTGGTTCGTA ACTCACGATA TTTCTTCTGG GCTTATGTAA
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| Protein sequence | MQLQCKKVRV LYKLLFITSD GDVMNTNDEL NINNVGDNSY DPHIGRESHV VPGRFGEPLK
VMNAQYSQGN ASAHPTHPLL LLLHGWGSNE EDLLDLLRVV APYNDAIALR APLKLAEGAY
SWFHDAVPQR EDLDYDMYAA AVAIDEWVHE NIPANRDIVP FGFSQGAALA VHVLRLNPSR
YRAAVSLSGF IAPSVPASSE EIALQDNDLA ERNTPVFFGY GLEDGVIPPY EFSAAAAWLE
EHTWLEERRY RGLDHAVDMN EIGDIRKWFV THDISSGLM
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