| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1307 |
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| Symbol | |
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| ID | 8708920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1563524 |
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| End bp | 1564234 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483394 |
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| Product | phosphoglycerate mutase family protein |
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| Protein accession | YP_003374495 |
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| Protein GI | 283783741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA ACGGCACTAA AGAATCCTCT CAGAAAGAAT GCTCGAAGCA GGGTTGCTTG
GTGTTACTTC GTCACGGTCA AACCGCTTGG AGTGTGTCTG GTCAGCATAC TGGGCGCACG
GATTTGCCTC TTACTGAAGT TGGTGTTGAG CAAGCAAAAG AGGCTGGTGC TAGATTGCAG
TGTGTGTTCA CAAAAGGTTT TGATGAGGAT TGTGTGCTTG TAAGCCCGCT TCGTCGCGCG
CAGCAAACAG CTCAGTTTGC TGGATTTGCT TCGTATACAA TTTGTGATAG CGCGCTGGAG
TGGGATTATG GTGCTGCTGA GGGTCGCACG CGCGCTGATA TTTCTAAACT AAGTGGAGTT
GAGGCGTGGG ATGTGTGGAA ACATGGTCCT AAAGTTCTTC CTTCTCACAT GGTTAGTGAT
GCTAAAGAAG TGCTTCCTAG TGGAGAGACA GTGGATGTGC ACAGGACTTC TGGAGAAAGC
TTGCAAGAGG TTTCGGATCG TACTCAAAAG ATTATTGATA TGGCAATGCC TAAATTGAAA
TTAGGTAAGG ACGTGCTTGT TGTTGCACAT GCTCATGTGT TGCGTATTCT TACTGCGCGC
TGGCTTGGAG TAAACCCAGA TTTTGCGCGA CTTCTTCGTA TGGATACCGC GCATTATTCT
GTGTTGGGCA CGTATAAAGG CGACAATGTA ATTGTGCATT GGAATTGTTG A
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| Protein sequence | MQNNGTKESS QKECSKQGCL VLLRHGQTAW SVSGQHTGRT DLPLTEVGVE QAKEAGARLQ
CVFTKGFDED CVLVSPLRRA QQTAQFAGFA SYTICDSALE WDYGAAEGRT RADISKLSGV
EAWDVWKHGP KVLPSHMVSD AKEVLPSGET VDVHRTSGES LQEVSDRTQK IIDMAMPKLK
LGKDVLVVAH AHVLRILTAR WLGVNPDFAR LLRMDTAHYS VLGTYKGDNV IVHWNC
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