| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1285 |
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| Symbol | thiS_2 |
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| ID | 8709839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1534983 |
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| End bp | 1535189 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483373 |
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| Product | thiamine biosynthesis protein ThiS |
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| Protein accession | YP_003374474 |
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| Protein GI | 283783720 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
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| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATCG TAGTCAATGG TGAAATTGTT GAAGCGCAAG ACGGATTAAC TGTTGCTCAG
CTTATTGCGC AACGTTATGG TTCGGATGCA GGACTTGGTA TAGCGGTCGC AATTGGCGAC
GATGTGCTTT CTCGCGCACA ATGGGAATCA GCCGTCATAT GTGATGGTAA TCAAATCGAG
ATTCTTAGCG CAGTTCAAGG CGGCTGA
|
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| Protein sequence | MQIVVNGEIV EAQDGLTVAQ LIAQRYGSDA GLGIAVAIGD DVLSRAQWES AVICDGNQIE
ILSAVQGG
|
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| |