| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1267 |
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| Symbol | |
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| ID | 8709917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1513608 |
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| End bp | 1514057 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483355 |
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| Product | phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 |
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| Protein accession | YP_003374457 |
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| Protein GI | 283783703 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0108349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTG ATATTGATGA GCTTCTCCCG GATTCTGCAG TAAACCTTGA TATTGCAGCG
AAAGATTGGC GTGATGCTAT TTGTCTTGCA GGCAATGCTT TGAAGGAGTC TGGCTTTACT
ACTGATGAAT ATACGAATCA GATGATTGAA ACAGTTGAGA AAATGGGCCC GTATATTGTT
ATTGCCCCAG GCTTGGCTTT GGCGCATTCG CGCCCGTCGG AAGCAGTGTT AAAAAGTGGT
TTGAGCTGGA TTCGTTTAAG TACGCCTGTT AAATTTGGTA ACACTGCCAA CGATCCGGTC
TCTTTAGTAA TTGGTCTTGC AGGTCACGAT GAAAATGAGC ATATTGGCGT TATGTCCGCG
GTTGCTGCAG CTTTGTCTAA TCCTGTGAAG ACTAGAGAAC TTGCGCAAGC AAAAAACGCT
AAAGAAATTC GCGCAATTCT TAAAAGTTAA
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| Protein sequence | MSADIDELLP DSAVNLDIAA KDWRDAICLA GNALKESGFT TDEYTNQMIE TVEKMGPYIV
IAPGLALAHS RPSEAVLKSG LSWIRLSTPV KFGNTANDPV SLVIGLAGHD ENEHIGVMSA
VAAALSNPVK TRELAQAKNA KEIRAILKS
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