| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1259 |
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| Symbol | yraL |
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| ID | 8708986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1505338 |
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| End bp | 1506240 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646483347 |
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| Product | S-adenosylmethionine-dependent methyltransferase, YraL family |
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| Protein accession | YP_003374449 |
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| Protein GI | 283783695 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0313] Predicted methyltransferases |
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| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000468862 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGTAACG AAGAAGATAG TTTAGGTAAA GTTGTTTTAG CTGCTACGCC TATTGGGAAT
ATGGCAGACG CTTCTGCACG ATTAATTAAT CTTCTTGAAA CTGCTGATAT TGTTGCTGCT
GAAGACACGC GTAGGCTTTA TGATTTAGCG AATCGCCTTG GTGTGCATGT TTCTGGTAGC
GTAATCGCAT ACCACGATCA TAATGAGCGA AATAAGGCAG ATGGCTTGCT AGACAAAGTT
GAGCAGGGTA GCACTGTTCT TGTTGTTTCA GACGCAGGTA TGCCTACCAT TAACGACCCG
GGTCTTGCTG TTGTTCGACG TGCAATAGAG CGAGATTTGC CTGTTACTTG CGCGCCTGGT
CCTAGTGCAG TTTTAGATGC GCTTGCTCTT TCTGGATTGC CAACCGATCG CTTCTGTTAT
GAAGGCTTTT TGCCTCGTAA ATCTGGTGAG CGTCAACAGC ATTTGCGCTC ACTTAAAGCC
GAGCGACGAA CAATAGTATT TTATGAGGCT CCACATCGTA TTGCAGAAGC AATGGAAGAC
ATATTGGCAG TACTTGGTTC TAATCGTCCA ATGGCGTTAT GCCGTGAACT TACAAAAGAT
TTTGAGGAAA TTCGTCGTGG AACTGTGCAA AGTATTCACG ATGGTGTTTT AGCGGATCCT
CCTCGAGGTG AAATAGTTTT AGTTATCGGT GGTGCAAGTG ACGAAGAAGT ACAGTCTGAA
AGCACAGATT TAAGCATTGA TGCTCTTGCA AAGCTTTCGC TTGAATGTGC AGAATCCGAA
GGTTTGCGCA TAAAAGAAGC AATTACAAAA GTAGTAAAAG AGCATCCGTT TGCTGACGGA
TCTTTTGCTA ATCGTAAGCA AGTTTATGCG TCTTGTCTTG AGCATAAACC TAATCAGAAA
TAA
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| Protein sequence | MCNEEDSLGK VVLAATPIGN MADASARLIN LLETADIVAA EDTRRLYDLA NRLGVHVSGS
VIAYHDHNER NKADGLLDKV EQGSTVLVVS DAGMPTINDP GLAVVRRAIE RDLPVTCAPG
PSAVLDALAL SGLPTDRFCY EGFLPRKSGE RQQHLRSLKA ERRTIVFYEA PHRIAEAMED
ILAVLGSNRP MALCRELTKD FEEIRRGTVQ SIHDGVLADP PRGEIVLVIG GASDEEVQSE
STDLSIDALA KLSLECAESE GLRIKEAITK VVKEHPFADG SFANRKQVYA SCLEHKPNQK
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