| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1240 |
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| Symbol | |
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| ID | 8709532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1474878 |
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| End bp | 1476077 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646483328 |
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| Product | surface-anchored protein domain protein |
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| Protein accession | YP_003374433 |
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| Protein GI | 283783679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000376372 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTACA AACAAAATGA AACATTGCAA GTAAAACGAA AGCATGTATA TTCTACTGCG
CTGCTTGCGC TCATATTTTC TTTAGTAACT TTGGTTGCAT CTTTATGTGC ACCAAATCCA
ATGCAGGAAA CTGCTTATGC TAATGAAGGC AATCAGCCAG TTATGATTCA AGCAGGTCAT
GCTGATTTTG GACCAACGCT AATCGACGGC AAATGGAAAT TGAAGATTCG TGATGATACT
GGTGACGAAC CAGTGTGGCG AGACCCAGAA AATGTGGTAT TTAAATTAGG TGGCAATTCA
ATAATTCCTA TGCCTGATGA TGCTGCCTAC AGTTTTATTG GCGAAAAGCC TGGAACCAAG
CTTTACGTAA TTCCACAAAC TCAAAATCCT GATGTGCCGT GGCTTGGTTG GAATACGCAG
GAAGGTGGCG TGCTTAACGA GCTCGATCGC GGTGCAAACC TTTCTCTTGA AGGAGTAAGC
GGCCCGGGTA AACTGCATGT TTACTTAGAA AATGGCAACA ACAATCCACA GCAACTTTGG
GATAGTACTA AAGGATATCC GCAAAACAGC TGGATTGAAG CCAACGCTCA TACTCACGTG
AATTGGGTGT TTTCTAAGCC TGGAATTTAT CATGTGAAGC TTACTTTTTC AGGAAAGCTT
AAAAATGGAC GCGCAGTAAG CGATACGCGT GTTCTTAATT TTGCAGTTGG AGATAATACC
GATCCTAATG CTGCTTTAGG TGCGGGTGCT GCTGGAGCAA GTGGCAACGA GGGCGACGAA
GAGGGTCAAG ATGAAGAAGA TAACGATGAA TCCGAAAAAG ATGAAGCTAA TCATCATCAC
GAACTCCTTC ACAACAAGCA TAAGCATTCT CACAAAGTAT CTGAAAAAAG TGACGATACA
GCTTTAGTTC TTCAAATTGT AGGTATTTTT GTGGCTATTA TTGCCGTAAT TATTGTGATT
TTTGTACTAA TAGCTGTAGT TAAAAGCAAG AAAGCACGAA ATCTTGCGCT TGCTAAGCAA
GTTTCTGCAC AAGCTAATCA ACAGTATGCA AATAATGCAA ATTCTGTGAA TAATGCAAAT
GGTGACAATA CCTTGCCAAA TCTAGTGCGT GATCAAGAAA CGACAGTAAT GTCACCAATT
AATAATTCTC AATATTCTCA ATCAGACAAT GTGCAATCTG ATGGCACTCA GTGGAAATAA
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| Protein sequence | MNYKQNETLQ VKRKHVYSTA LLALIFSLVT LVASLCAPNP MQETAYANEG NQPVMIQAGH
ADFGPTLIDG KWKLKIRDDT GDEPVWRDPE NVVFKLGGNS IIPMPDDAAY SFIGEKPGTK
LYVIPQTQNP DVPWLGWNTQ EGGVLNELDR GANLSLEGVS GPGKLHVYLE NGNNNPQQLW
DSTKGYPQNS WIEANAHTHV NWVFSKPGIY HVKLTFSGKL KNGRAVSDTR VLNFAVGDNT
DPNAALGAGA AGASGNEGDE EGQDEEDNDE SEKDEANHHH ELLHNKHKHS HKVSEKSDDT
ALVLQIVGIF VAIIAVIIVI FVLIAVVKSK KARNLALAKQ VSAQANQQYA NNANSVNNAN
GDNTLPNLVR DQETTVMSPI NNSQYSQSDN VQSDGTQWK
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