| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1237 |
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| Symbol | |
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| ID | 8709757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1470147 |
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| End bp | 1470935 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483325 |
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| Product | anchored repeat-type ABC transporter, ATP-binding subunit |
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| Protein accession | YP_003374430 |
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| Protein GI | 283783676 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000165117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGAAA ATGCAGTAAT TTGCGCACAA AATTTGAATA TTTCGTACGG GAATCGCGCT
GTTGTAAAAG ATGTTTCTTT TACCATTAAT AGTGGCGAAT TCGTGGGATT ACTTGGCGCA
AACGGTGCCG GTAAAACAAC GCTATTTCGT GCAATTATGG GTTTGATTCC GCATACTGGA
AAACTCGAAG TGCGTGCTCC TCATATGGAA GGTGCGAAAC TTAATTCTCG CGTATCTTAC
GTTGGATACG TGCCTCAACG TCACGATATT GCGTGGGATT TCCCACTTTC TGTTTTAGAT
GTAGTGATGA TGGGTAGGAT TCGTCATATT GGTTACGTTC GTCGCGCTAA AAAAGAAGAT
TACGAGATCG CATTAAACTC GCTTGAACGC ACAGGAATGG CTGATTTCCA AGATCGCACG
ATTGGTGAAC TTTCTGGAGG TCAGCGGCAA CGCGTTCTTG TTGCGCGAGC ATTGGCTGGA
GAGCCGCGTT TACTTTTGCT AGACGAACCG TTTACTGGAC TTGATATGCC TACTCAGGAG
CTGCTTACCG ATTTGTTCTT AAAATTGTCT GCTTCTGGTG AAGCAATTCT CATGAGCTCG
CACGATATTA TTGGTTCAAT TAACTCATGC TCGAGAATAA TGCTATTTGA TGGCACTATT
GTGGGCGACG ATGAGCCGCA ACATTTGCAA ACAGAACAGT GGGTACGAAC CTTCCACGTA
GCTCCGCAAA ATCCGCTTAT TAAAGCAGTT GAGCGCGTAA TTGGTAAGGA AAGTGTGGTG
AAAGAGTAA
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| Protein sequence | MEENAVICAQ NLNISYGNRA VVKDVSFTIN SGEFVGLLGA NGAGKTTLFR AIMGLIPHTG
KLEVRAPHME GAKLNSRVSY VGYVPQRHDI AWDFPLSVLD VVMMGRIRHI GYVRRAKKED
YEIALNSLER TGMADFQDRT IGELSGGQRQ RVLVARALAG EPRLLLLDEP FTGLDMPTQE
LLTDLFLKLS ASGEAILMSS HDIIGSINSC SRIMLFDGTI VGDDEPQHLQ TEQWVRTFHV
APQNPLIKAV ERVIGKESVV KE
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