| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1235 |
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| Symbol | |
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| ID | 8709916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1468380 |
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| End bp | 1469264 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483323 |
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| Product | acyltransferase |
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| Protein accession | YP_003374428 |
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| Protein GI | 283783674 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000143231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTATCAA AAGGAAAACC TTCGCCAAGA AGTGCAGTAA AACCACTCAG TGATGAGCAA
GTAAAGCTTT TAGCAAGTAA ACACAATTTA GTTGATCCAA CGTATTACTA TCCAACAGGA
AAACGTAAGC CAAATCAGGC AGAAATTGAC GCGCAAAATC CTAAGGCTGC TGAAAGATTG
TTAGAAGGAA CGTCGCGCGT ATTGCGTTCG CGCTGCAAAG TACGCGCGTG GGGATTGGAA
AACGTGCCAG AAGAAGGCGT GTTTATTACA GCTTGCACGC ATGTGACGAT GTTTGACGTT
TTCATACCTA TGACTGCACT ATTCCACCAA GGTCGTCGTC CGCGCTACAT GGCAAAAGCG
GAACTCGCTC ACTGGCCAAT CTTAGGCAAA TGGTTTCAGC TTGTAGGCAT GCAGTCGGTT
CCTCGCAGAA GCGGAAAAGC GCGAGAAATA GAAGAAGAAT CTATTAAAAT CCTCACCAAT
GGCAGACCTT TAAGTGTATG GCCTGAAGGA ACAGTTACGC GCGATCCTAA AAAATGGCCG
ATGAGCATGA AGCCCGGAGT TGGAATAATC GCTCTCGAAG CATCGCGTAG ACTCGGACAT
CAGATTCCGC TATTTTGCGC TGTTGTGTGG GGTGCTGCAA GCATTAACCA CTGGTGGCCG
TGGCCAAAGA AAAATGTTGT AATGTGCTAC GATACCCAAC TCGATTATTC CGACTTGCTG
CAGGGAAGCG AAAATTGGGG AGAGCTACCT CCTCTTGAAT CTGCTGAAGA GTTGGCTCGT
CGCGTGCGTG TGCGTATGAC GCAGATTATG GAAGAAATTC GTGGAGAAAA ATCTCCTGCA
GGATACTTCG ATTACAGGCA GATGAAACGC GTTACGGAAG AATAA
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| Protein sequence | MVSKGKPSPR SAVKPLSDEQ VKLLASKHNL VDPTYYYPTG KRKPNQAEID AQNPKAAERL
LEGTSRVLRS RCKVRAWGLE NVPEEGVFIT ACTHVTMFDV FIPMTALFHQ GRRPRYMAKA
ELAHWPILGK WFQLVGMQSV PRRSGKAREI EEESIKILTN GRPLSVWPEG TVTRDPKKWP
MSMKPGVGII ALEASRRLGH QIPLFCAVVW GAASINHWWP WPKKNVVMCY DTQLDYSDLL
QGSENWGELP PLESAEELAR RVRVRMTQIM EEIRGEKSPA GYFDYRQMKR VTEE
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