| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1234 |
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| Symbol | |
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| ID | 8709359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1467243 |
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| End bp | 1468238 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646483322 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein |
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| Protein accession | YP_003374427 |
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| Protein GI | 283783673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000139453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGTTA CGGTGTTGGG TGCTGGTGCT TGGGGAACTG CGTTTGGACA AGTACTTGCG
GATGCAGGAA ATCAAGTGAC AATGTGGGCA ATAGAGCCGG AAATTGTTGA AGGAATTCGC
GATCATCATT ATAATGGCGT GCGTCTGCCC AGCGTAGAAA AACTTCCAGA AAACATGACT
GCAACTGGGG ATCGAGCGGA GGCTGTTGCG AATGCGGATA TTGTAGTTGT GGCTATTGCG
GCACAGTTTG CTCGCGTTGC GTTAGCAGAA TTTGTGGGGC TGATTCCGCA AAATGCGATT
GTTGTTTCGC TGATGAAAGG CATTGAGCGC ACAACCGGAA AGCGCATGGA TGAAGTCGTG
TGCGAAGCAT TGAACTTGCC GCGTAACCGT TTTGCTGCAC TTTCTGGACC AAACTTGAGC
AAGGAAGTTG CATCTCGCCA CCCGGCTGCA GCAGTAGTTG CTTGCGCAGA AAAGTCTCAG
GCAGAAGTAG TTGCAAAAGC ATGCTCAAAC AGCTACTTTA AAGCATTTGT GTCAACAGAC
GTAATCGGTG TAGAAATGTG CGGATCGCTT AAAAACGTGG TTGCGCTCGC AGTTGGCATG
GCTCGAGGCG CGGGATACGG TGAAAACACG GCGGCTATGA TTGAAACGCG CGGTTTGGCA
GAATTGACGG CATTGGGCGT TGCAGAAGGC GCAGATTCGC GCACTTTTGC AGGTCTTGCT
GGCTTTGGTG ATTTAGTTGC AACTTGTGGA TCTCCTCTAA GCCGAAATTA CACTTTTGGG
TCAAATCTTG GTAAAGGCAT GAGCGTTGAA GAAGCAACAG CTGTGAGCAA TGGTGTTGCA
GAAGGCGTGC CAACTACAAG CGCAGTAGTT GCAATGGGCA AGCGTTTGGG CGTTGCGACT
CCGTTCGCAA GTGCAATGGC TCGCGTGCTT GAAGAAGGAA TCTCCTGCCA AGAAATGCTC
GCAATGCTTT TCGACGACGA CGTTTGCGAA GAGTAA
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| Protein sequence | MNVTVLGAGA WGTAFGQVLA DAGNQVTMWA IEPEIVEGIR DHHYNGVRLP SVEKLPENMT
ATGDRAEAVA NADIVVVAIA AQFARVALAE FVGLIPQNAI VVSLMKGIER TTGKRMDEVV
CEALNLPRNR FAALSGPNLS KEVASRHPAA AVVACAEKSQ AEVVAKACSN SYFKAFVSTD
VIGVEMCGSL KNVVALAVGM ARGAGYGENT AAMIETRGLA ELTALGVAEG ADSRTFAGLA
GFGDLVATCG SPLSRNYTFG SNLGKGMSVE EATAVSNGVA EGVPTTSAVV AMGKRLGVAT
PFASAMARVL EEGISCQEML AMLFDDDVCE E
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