| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1217 |
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| Symbol | nusG |
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| ID | 8709250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1447564 |
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| End bp | 1448460 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646483305 |
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| Product | transcription termination/antitermination factor NusG |
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| Protein accession | YP_003374411 |
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| Protein GI | 283783657 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000707521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACTGATG AATTCAATTT CGAAGAAGCG AGTGAAGCTG ATGAGGCTTT TGCTTCTCAT
GATGCTGACG AAGCAAACGA GTCAGCTGTG AATGATGAAG CTGCTGCTTC TAGCGAGTCT
GTTGAAGCTG ATGTGGATGA GGAATCTGCT GATGTTGCAG CTGATGTAGC TGATGGCGCT
GCTGCTGACA GTGTTGCTGA TGTTTCTAAC GAAACTGACG AAACTAGCGA TGCTGATGAA
ACTACTGATG CTGACGATGC GAACGAAGCT GACCCAACTG ATGCCGGCGC AATCGCTGTA
GCAGAATTTT CTAAGAAACT TCGCACTTTG GAAGGCAAGT GGTACGTTCT TCACACGTAT
TCTGGTTACG AAAAGCGCGT AAAAACTAAC GTTGAATCCC GCGTGCAGAA CTTTGGTTTG
GAAGATAAAA TTTTCCAGAT TGAAGTTCCT ATGGAAGAAG TCGAGAAGCA TACGGAAAAG
GGTAAGAAGG TTATTACTCG CGTGCGTGTG CCAGGCTATG TGTTGATTCG CATGTGGCCG
GATGAGAACG CTCGCCGTAT TGTGCGCGAG ACTGAGGGCG TGACTGGTTT CGTTGGTCCT
TCTAGAGAGC CTGCACCATT GAGCCGCAAA GAAGTTGTGT CAATGATGGC TCCGATGATT
GCTTCTGAAG CTTTGAAGAA TGCTGGCGAT AAGCCGGCTG CAGCACGTAA GCGTAAGGTT
GAGGTTGCTT ACAAGGTTGG CGATCAGGTA ACAGTTACCG ACGGTCCATT CTCAACGATG
GCAGCTGTGG TTTCGGATGT GGAGCCTACA ACTCAGAAGC TTACGGTGTT GGTTTCCATC
TTTGGACGTG AAACTCCTGT GGAGCTTGGA TTCAACCAAG TGGAGCCGAT TGTTTGA
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| Protein sequence | MTDEFNFEEA SEADEAFASH DADEANESAV NDEAAASSES VEADVDEESA DVAADVADGA
AADSVADVSN ETDETSDADE TTDADDANEA DPTDAGAIAV AEFSKKLRTL EGKWYVLHTY
SGYEKRVKTN VESRVQNFGL EDKIFQIEVP MEEVEKHTEK GKKVITRVRV PGYVLIRMWP
DENARRIVRE TEGVTGFVGP SREPAPLSRK EVVSMMAPMI ASEALKNAGD KPAAARKRKV
EVAYKVGDQV TVTDGPFSTM AAVVSDVEPT TQKLTVLVSI FGRETPVELG FNQVEPIV
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