| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1201 |
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| Symbol | |
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| ID | 8709419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1427221 |
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| End bp | 1428123 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483290 |
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| Product | biotin-(acetyl-CoA-carboxylase) ligase |
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| Protein accession | YP_003374396 |
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| Protein GI | 283783642 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000612982 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTATTT TTTCTTCGCA AAGTGTGGCA TTGATGCCGC AGACATCAGA AGTAGCAGAT
TTGGTAAAAT ATTTCGCAAT TACAGATTCT ACGCAAAATA TTGCGCGAGA AATGATACAA
AAAGGCGAAA TAATCGCGCG AGATGACGGA AAGCCAACAA TAGTTGCGAT TGTGGCATAC
GAGCAAACAG CAGGAAGAGG ACGATTAGGG CGTGCGTGGG TAAGTCGGCC GGGAGAAAGC
TTTTTAGTTT CATTCGTAAC GTTGCTGCCG AAGTCAATTG TTATGGACGC AAGTCACAAT
GGCTGGCTGC CTATTATTGC AGGGCTTGCA GCTCGTGACG CACTTCTAGA AACGTTTAAA
GAGTGCGGAA GTTCGCCGAT ACACGGTGAT GCTTGCGCGA TAAAACTTAA ATGGCCTAAC
GACGTGTTTT TGCACGATTG TAAAGAAGGC GGAATCTTAA CAGAAATTGT AGCCGATCCA
AGCAAAGACA ATGTTGTTGG AGTAATTTTT GGAATCGGAT TGAATTTGTG CGTGCCGCAA
GAAGTGCTGC CAATTAAGAT GGCAACTTCG TTGCAAATGC ATATGACTGA TTTGCCGGAA
TCTAAAGAAT TGCGTGATAC GATTGCTGCA AAAATAGTTA CTGGATTGAG GACGAGATTG
TGCGATTTTA TGCGTGATTA TCCAAGTAAC GCTGCCGATT TGCTTAAAGA GGTAAATGGT
GTGTGTTGGA CGCTTGGGCG CAAAGTGAAC GTGCATCCGG TTGATGGAAG CGTTGTGACA
GGAACTGCTG TGCGGCTTGG AGAAGATGCG TCGCTTACAA TTCGTGAGGC ATCTGGCGAG
GAAATTGTGG TAAAAAGTGG CGATGTGCAC GCGGTTGCGT ATGAAGCGCG ACGACATGCT
TGA
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| Protein sequence | MTIFSSQSVA LMPQTSEVAD LVKYFAITDS TQNIAREMIQ KGEIIARDDG KPTIVAIVAY
EQTAGRGRLG RAWVSRPGES FLVSFVTLLP KSIVMDASHN GWLPIIAGLA ARDALLETFK
ECGSSPIHGD ACAIKLKWPN DVFLHDCKEG GILTEIVADP SKDNVVGVIF GIGLNLCVPQ
EVLPIKMATS LQMHMTDLPE SKELRDTIAA KIVTGLRTRL CDFMRDYPSN AADLLKEVNG
VCWTLGRKVN VHPVDGSVVT GTAVRLGEDA SLTIREASGE EIVVKSGDVH AVAYEARRHA
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