| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1187 |
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| Symbol | |
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| ID | 8709784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1393012 |
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| End bp | 1393950 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483277 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374384 |
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| Protein GI | 283783630 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATT CCTTAATAAG CGGACTGTTT TGGGGACTTG ATACTGCTTT GCTTGCGGTA
TTGGTTGCGT TATCTGTTCA TGGTTTAACA CCTTCTGCAG TATGGTATGT GGGCGTTGTG
GGCGCTTGCG TTCACGATGT TGTGTGTGCT GTAATATTGT GGATTTATAT GGCTTGTCGT
TCAAAGTTGC GCGAAACTGT TGCTCTTTGC AAACGTACGA AATTGATTGT GCCTATTGTG
TTGAGTTCGC TTCTTGGAGG CCCAATTGGT ATGACCGGTT ACGCTATTGC GGCAAGCAAT
ATTGGTGCCG GTTACGCTGC TGCGATTTCC GCACTGTACC CGGCTTTTGG CATAGTACTT
TCTTCTATTG TGTTGTGCGA ACGCTTAAGT GCGTTGAAAT ATTGTGCTTT TGCTGTAACG
CTTATTGCGG TAGGAGTGCT TGGCTACTGT TCTTGCGCGG AATCTTCAAC TGCAACTGTC
TTCTCTCCGG GCAGCATAGT CTTAGGTTTG ATTGCGGCTA TTTTCAGTGT TATTGGTTGG
GGAAGTGAAG CCGTTGCTTG CGCGTGGGCT ACCAGAAAGC AAAGCGTGGA CGACGAAGTA
ATGCTGCACG TGCGCGAAAC TGTTTCCGCA CTGTCGTACG CCTTACTCAT TGTGCCGTTG
TGTACGATAC TGCCGGTTTT TAGTGTAAAG ATTATGCAAT CAGCCGGCTT TATTGCGTTA
GCTATATTTA TAGCGTTACT TGGTACTGCT TCCTACTTGT GCTACTACCG CGGTATTGCT
CAGGTTGGTG CGACGCGCGC TATGGCTGGA AATATTACGT ACGCGGTGTG GAGCATGATT
GCAGCAGCGT TACTTTCTCA AACGATTCCG CCGCTTATTG CGTGGGTTTG TTGCGTGGTG
ATAATTGCGG GGACGGTAGT GGTGGCTTCC GAAAAATAA
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| Protein sequence | MKYSLISGLF WGLDTALLAV LVALSVHGLT PSAVWYVGVV GACVHDVVCA VILWIYMACR
SKLRETVALC KRTKLIVPIV LSSLLGGPIG MTGYAIAASN IGAGYAAAIS ALYPAFGIVL
SSIVLCERLS ALKYCAFAVT LIAVGVLGYC SCAESSTATV FSPGSIVLGL IAAIFSVIGW
GSEAVACAWA TRKQSVDDEV MLHVRETVSA LSYALLIVPL CTILPVFSVK IMQSAGFIAL
AIFIALLGTA SYLCYYRGIA QVGATRAMAG NITYAVWSMI AAALLSQTIP PLIAWVCCVV
IIAGTVVVAS EK
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