| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1184 |
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| Symbol | |
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| ID | 8709610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1388036 |
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| End bp | 1389286 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483274 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374381 |
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| Protein GI | 283783627 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1835] Predicted acyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGTAG AACAGAAACA ATCAGCGCAA AAAGTAGCGT CTTCTGCACA AGCTCAAGCG
GTATTACAAT CGACCAAAGA CCTGCAAAAT GGCACACAAA AAGACCTGCA AGTTGAAGTC
TTGCGAATTA TTGCAATGCT TATGATTGTG GCCTGCCACA TGATCATACA TTTGAACATT
CGCGAGCACA GTTTCAATAT GGAACTTTTG CCGGCTCCAG GCTTGCGTTC AGCACTTAAA
TTCTTAGTCG TACAATACGG TCAAGTTGGT GTCTCAACCT TCTTTATTAT TTCCGGCTAC
TTTTTATGTC GCAAAACCTT CCGCTACCGA CGCGTTTTTG CAGCGTGGGC GCAAATGTTC
TTCTACTGCA TTATCGTGCT GGCAGTAACC TTCGTAGCAG ACTGCTTTGG CTTACTTCCG
GAAAATTTGA GCAACTTACT TCACGGAAAA GAACTTGTCT ACACGCTGTT GTGGAATGTG
ACGCCATTTA CTTACCGAAG CTATTGGTTC ATGAGCGCGT ACTTAATCAT GCTCATGTTC
ATGCCTTTTA TCAACATTCT TATAAGTCAC ATGACTCAGC GCAATCATGC TATGCTGCTG
GTACTTCTTG CGTCAATCTC ACTTATTCCG CTATATTTTG GCAAAAATTA TACTTGGAAC
GATATTATTT ACGCAATTTT TGGATATTTA GCCGGAGCTT TTATTGCGCA GTACGGTAGC
GGAATAAAAA AACTTACTAC GAAGCGACTT TGTGCGTGCG TAGCAATATC TACTGTTCTT
ATGCTCGCTT TCGACTATGT TGCTTCGTCC GGGAATAAGT TTGTGCGAGT TCTTACGTGG
GATCAGCAGG TCCACAGCGG CATTGGAATA CTGCCAATGA TTATTGCAAT GTGTATTTTC
ATTCTCGTAC ACCGAATAAA TATGCTGCGA ATTAAAGGAC TAGCAAGAAC CGTAATTTTG
CGCGTTTCCA AAGCAACTTT CGGAGTGTAC CTTCTTCACG AGCACATGTT TATTTTCATA
GCGTTGTGGA CGTTCGTGGC GTGGATGCTT CCTACAACTT CCTCAAGCGC ACTCATAGTG
CTACTTTACG CAATTACTTT AATTTGTACG TACGCAGCAC TTTCAGTTGT TGCAGTTGTA
ATAGATCTCG TTATCAAACC AATTTCCAAC CGAATTGCGC TAACTTTGGA GCATGTCGCC
AATTGCGTAT GTTCTGTGCA CAAAACGGAT TCGCAATCCA AAATGGAGTA A
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| Protein sequence | MVVEQKQSAQ KVASSAQAQA VLQSTKDLQN GTQKDLQVEV LRIIAMLMIV ACHMIIHLNI
REHSFNMELL PAPGLRSALK FLVVQYGQVG VSTFFIISGY FLCRKTFRYR RVFAAWAQMF
FYCIIVLAVT FVADCFGLLP ENLSNLLHGK ELVYTLLWNV TPFTYRSYWF MSAYLIMLMF
MPFINILISH MTQRNHAMLL VLLASISLIP LYFGKNYTWN DIIYAIFGYL AGAFIAQYGS
GIKKLTTKRL CACVAISTVL MLAFDYVASS GNKFVRVLTW DQQVHSGIGI LPMIIAMCIF
ILVHRINMLR IKGLARTVIL RVSKATFGVY LLHEHMFIFI ALWTFVAWML PTTSSSALIV
LLYAITLICT YAALSVVAVV IDLVIKPISN RIALTLEHVA NCVCSVHKTD SQSKME
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