| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1175 |
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| Symbol | prs_2 |
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| ID | 8709195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1377789 |
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| End bp | 1378802 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483265 |
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| Product | ribose-phosphate diphosphokinase |
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| Protein accession | YP_003374373 |
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| Protein GI | 283783619 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.475519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACAA TTCTTGAAGG CAATCCAAAA AAGCAGATGA TGTTAGTTAC GGGTCGCGCA
TACCCAGAAC TTGCTAATGA GACTGCACAG TATCTTGGTA TTGATGTGCT TGAGACTACT
GCCTACGATT TTGCGAATGG CGAAATGTAT GTGCGCTTTA CTCAGCCTGT TCGTGGTTCG
GATGTGTTTG TGCTTCAGGC ACACACGAAT CCTATTAACA ATTGGATTAT GGAACAGCTG
CTTATGGTCG ATTCTTTGCG ACGCGCATCT GCTCGCAGTA TTAACGTGGT TGCACCGTTC
TTTGGATATT CTCGCCAAGA TAAGAAGCAT CAGGGACGTG AGCCTATTAC TGCTCGACTC
ATGTTTGACT TATTCCGCGC TGCTGGTGCC ACGCGCATTT TGACTGTTGA CATGCACGCA
ACTCAGGAGC AGGGTTTCTT TGACGGGCCT GTTGACCATT TGACTGCGAT GCCTGTGCTT
ATTGATTATG TGCGAAACTC TATGAAGCTC GATAATGCAA CTATTGTGTC TCCTGATGCT
GGTCGCATCA AAGTCTCTGA GCAATGGGCT GCAAAACTCG GAGATTTACC TCTTGCTTTT
ATTCATAAAA CGCGCGATAT TACGCGCCCT AACCATGCTG AAGCTCACGG CATCATTGGT
GAGATTAAAG GACGCGATTG CATTGTTGTA GACGATATGA TCGATACTGC TGGCACTATT
TGCGAAGCTG TACGTACTTT GCGTGAGGCT GGAGCAAAAT CTGTTACTTT GGTTGCAACG
CATGCTTTGC TTTCTGGACC TGCTGTTGAG CGTTTGAAAG CTGCTGGAGT TCGCGAGATT
ATTGTGACGG ATACAGTTCC TGTGCCTGAA GAGAAGCGTC TTGATAATAT GACGGTTCTT
TCGATTGCGC CGCTTCTTGC TGCTGGCATT CGTTCCGTGT TCCGCTCTGG ATCGCTTGTG
TCGCTTCGCA ACGCACTTCC GGAAGATATG AAGCAGCATA ATATTTACGC ATAA
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| Protein sequence | MSTILEGNPK KQMMLVTGRA YPELANETAQ YLGIDVLETT AYDFANGEMY VRFTQPVRGS
DVFVLQAHTN PINNWIMEQL LMVDSLRRAS ARSINVVAPF FGYSRQDKKH QGREPITARL
MFDLFRAAGA TRILTVDMHA TQEQGFFDGP VDHLTAMPVL IDYVRNSMKL DNATIVSPDA
GRIKVSEQWA AKLGDLPLAF IHKTRDITRP NHAEAHGIIG EIKGRDCIVV DDMIDTAGTI
CEAVRTLREA GAKSVTLVAT HALLSGPAVE RLKAAGVREI IVTDTVPVPE EKRLDNMTVL
SIAPLLAAGI RSVFRSGSLV SLRNALPEDM KQHNIYA
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