| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1167 |
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| Symbol | |
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| ID | 8709493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1362858 |
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| End bp | 1363934 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 646483257 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374365 |
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| Protein GI | 283783611 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000105813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCGTATT GGGAAAGATA TTTAGATAAT GTTGGGGGCA TTATGGCAGA AGAGAAGAAA
GAGATTGTGA TAATAGATGA AACTACACTT AAAAGTAAGA TTTACTATAT AAGAAATCAA
AAAGTTATGC TTGATTCGGA TTTAGCTGAG ATTTATGGAT ATTCTACAAA AAGATTTAAC
GAACAGGTTA AAAGGAATAT TGAAAAATTT GATGACGATT TTATGTTCCA ATTAACCGAT
GAGGAAGTAT CTGAACTTTC AAGGTCGCAT TTTGCGACCT TGAACAAAGC GCAAGGCAGA
GGCAGTAATA TTAAATACAA ACCTTATGCC TTTACGGAAC AGGGCATCTA TATGCTTATG
ACTGTATTAA GGGGAGAACT GGCAGTTAAA CAGAGCAAGG CTTTAATACG AATGTTTAAG
CAGATGAAAG ACTTCATTGT TGAAAATAGA GACTTTCTTA GTTCAAAAGA AATGACGCAA
CTGTTATTGC AAACAAGTCA AAATACAAAT GATATAATGC AGCATTCAAA AGAAATAGCA
AATATAAACG ATAAAATTAG CACCTTGGCA ACAAAAGAAG ATTTGAAAAA GGTAATGGAT
AATTTTATAG ATAGTAACAC CTACAAGCAT TTTCTTTTGC TGAATGGAGA TAAGATAGAA
GCAGATGTTG CCTATACAAA AATATATAAG TCAGCAAAGA AAAGCATTTA TGTTATAGAT
AACTATATAG GGCTTAAAAC TTTGGAATTT TTAAGGGCTG CAAGAGATAA CATACAAATC
ATAGTTTTTA GCGATAATGT AAGAAATAAA GATATGCTTA CAAAAAATAT TTTAGATGAT
TTTAGAAAAG ATTATCCTAA TATAGACCTG AATCTGAAGG TATCCGATAA AAAATACCAC
GATAGATATA TTGCACTAGA TTTTGGGACA GAAAATGAAG TCTTTTATCT TTGTGGAGCA
TCATCAAAGG ATGCGGGAAA TAAAATATCA AGTATTACTC AAATAGAAGA ATCATCTAAG
GATATGTATC ATACAATGTT TGCTGGAATG TTAAACAATA AGAATTTGAA AATTTAA
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| Protein sequence | MAYWERYLDN VGGIMAEEKK EIVIIDETTL KSKIYYIRNQ KVMLDSDLAE IYGYSTKRFN
EQVKRNIEKF DDDFMFQLTD EEVSELSRSH FATLNKAQGR GSNIKYKPYA FTEQGIYMLM
TVLRGELAVK QSKALIRMFK QMKDFIVENR DFLSSKEMTQ LLLQTSQNTN DIMQHSKEIA
NINDKISTLA TKEDLKKVMD NFIDSNTYKH FLLLNGDKIE ADVAYTKIYK SAKKSIYVID
NYIGLKTLEF LRAARDNIQI IVFSDNVRNK DMLTKNILDD FRKDYPNIDL NLKVSDKKYH
DRYIALDFGT ENEVFYLCGA SSKDAGNKIS SITQIEESSK DMYHTMFAGM LNNKNLKI
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