Gene HMPREF0424_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_1152 
Symbol 
ID8709644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp1333785 
End bp1334471 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID646483243 
Productacetyltransferase, GNAT family 
Protein accessionYP_003374351 
Protein GI283783597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.294962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG AATTTCGTTC TGTAAAACTC AGTGATATTG ATGCAATGGT TAAAGAATAT 
GAACGTACTT GGGGTATTGC GCAAAAAGTT GGGAAAGATG CTTCGTTAAG TCTTTCTCGA 
AGATGTGTGT TGCATTACTT AGAACCTTCA ACGCATGGTA CTATTGCTGA AATAGACGGT 
AAGTTTATGG GTCTGCTTTT GGCGCGAGTT TTTGACGCAC CTGTTTTATT TCCAGAAGTA 
GGGAGAATGC TTCGCGAGCA AGAAGCCGCA ATGAAAGAAA ATTGTGACAA AAACTATGCT 
CTCGCTTTAG AAGAAGCGTA CGGCATGCGC GCGTTGGAAA CTAAACTTGA AGCGAAATCT 
CATATCAATA ATTTAACTCA AGCGGAATTG GAGCTTTTCC TTGTTTCTCC AGATGCTCGT 
GGGCATGGTG TTGGTGGAGG CTTGTGGAAG CGAACAATGC ATATGCTAAG AAATAACGGA 
GTAAATCGTT ACTATTTGCA TACTGATTCA GCGTGTGACG TAAGCTTTTA TGATTATCAC 
GGGCTTAGAA GAGATGCTTC TTTTATGCGC TCGGATCATC CTTATGAAGC TAAGAACGTG 
AAATCTTTGG TGGATGACTT GTATATTTAC TCAGGTGAGC CGAGAGTTCG TTCAAAGCAA 
GCAAATGCTC GTTCTAAAAT GCGTTAA
 
Protein sequence
MTVEFRSVKL SDIDAMVKEY ERTWGIAQKV GKDASLSLSR RCVLHYLEPS THGTIAEIDG 
KFMGLLLARV FDAPVLFPEV GRMLREQEAA MKENCDKNYA LALEEAYGMR ALETKLEAKS 
HINNLTQAEL ELFLVSPDAR GHGVGGGLWK RTMHMLRNNG VNRYYLHTDS ACDVSFYDYH 
GLRRDASFMR SDHPYEAKNV KSLVDDLYIY SGEPRVRSKQ ANARSKMR