| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1136 |
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| Symbol | |
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| ID | 8709608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1310867 |
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| End bp | 1312519 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483227 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374335 |
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| Protein GI | 283783581 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATGA TTTTTACCAT GGTTCGCCTT CGCTGGGCGC TTACTTTTTC TGTTATGCGA
AAGTCAATTT GGCAAAAAAT TGGCTTTGCT ATAGCAATTG TTTTTGGACT TGCGCTTATA
TGCGCTCTTG GTTTTGCTGG CTGGGAAACT GGCAAGTACA TTAATCCAGG AATGCTTGCA
GATACTAAAA ATTGGCAGGA ATTCCAATTG GCTCCAATAA TGGTTGCGTC GATTGTGTCA
ATTTTTACGC TGTTTATAAA CGTGTTTATG TTTGGCAGCG ACACAACACT AAAATCGCGT
AGTTTTGCGC TTTACGGCAT TCCTTACGTA AAGCAGCAAG CTGGCATGCT TCTTGGCTCT
CTTTTTGGAG CGCTTTCAGT AAGCTGCACA ATCGCGCTTG CTTTGTGGTC TTTAGCGTAC
AGAAGCTTTG GAATTGTGCC GGTTTTAGTC AGCGTAATTG CAGCTCCGCT TTACGTTGCA
ACAATCGTGT CTTTAAGCAA AATGCTTATT GAGCTTTTAG ATACTATTTT AATAAACAAG
CGTTCAAGAA ACATTTTTTA CTTTGCCATT TTTATAGCGT ACATGATTTT TGTTTCATCA
ATGAATACGC ATAGCCCTTC GCCAAATGGA ATTGCGCTAG GCACAAGTTT CTGTGCTGCG
TCCGCTTTTA CACCATTAAG TGCAGCTATG GCTTTGCCGC TCGATGCTAT TAATGGCAAT
TGGCTTGCTC TTGCTATTCG CTTCCTTATT TGCGTTGTAA CGATTGCTGC TTGCTTTGCA
ATCTCTGTAT TTTGCGCAAA ATTAGAGCCG AAGTTGCTTC GTGGTGAGCA AAAAACAGTT
GTTAAAACTA AGGGAATCGG CTTGTTTGCA GCAGTTCCAG ACAACACAGT TGGTGCGATT
ATTGCGCGAA TTATTAGCGT TATGAGAAGA GATATGCGTC AGCTATTTTT GCTTATTGCG
CCGCTTTTTA TGCTGGTAGT TGCAGGAGGA AGTAGTTTTA AGGCTAAAGG ATTTGATTCT
CTAACAGATA ACTTAGGTGT TTCTGGATGG ATGATGTATG CTGCTTTGCT TATGGGCATG
GTTGTTGGAA ACAATATTGC TTACGATGGC ACAGCTTTTA CTATGCATGC GATTATTGGA
GTAAAAGGTT TGCACGATCG CTTAGCGAAC GCAATAGTTT GGTCAGTGAT TTGCGCTGTT
TATTTTGCGA TTATTGGAGT AGGGGTTTAC GTTTTCCTTT TCTTTGTAGC AAATGTTCAG
CAAAATGTGA ATGCAGTTAT GTTCCAAACT CTTTGTCCAA TTGGAATAGC TTTTGCTTCC
ATAGGCATTG GCTTAATTTC TTCGTGCATT GCAATGTACC CTGTGGCATC AATCGAAAAG
CCATTTTCTA GGCCGCAAGG AAGTGCTGGC GGGCGAAGTT TTGCAGCTAT AGGCTTTATG
CTTCTTTCTG TAGTTTGCAT GATTCCTTCG GTTGCGGCTG CGATTGCGTT TATGATTCTT
GCGCCGCAAC TGCTGTGGAT TGCAAGCATT TTGTTTGTAG TAAACGGCTT GATTGTGCTG
GTTGTTGGCG TGATTCTTGG TGGCAAAGTA ATGGATAAGC GCATGATTCG CATTGTAGAA
AACTTGCGCA GATTCGCGTC TATTACTGCG TAA
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| Protein sequence | MSMIFTMVRL RWALTFSVMR KSIWQKIGFA IAIVFGLALI CALGFAGWET GKYINPGMLA
DTKNWQEFQL APIMVASIVS IFTLFINVFM FGSDTTLKSR SFALYGIPYV KQQAGMLLGS
LFGALSVSCT IALALWSLAY RSFGIVPVLV SVIAAPLYVA TIVSLSKMLI ELLDTILINK
RSRNIFYFAI FIAYMIFVSS MNTHSPSPNG IALGTSFCAA SAFTPLSAAM ALPLDAINGN
WLALAIRFLI CVVTIAACFA ISVFCAKLEP KLLRGEQKTV VKTKGIGLFA AVPDNTVGAI
IARIISVMRR DMRQLFLLIA PLFMLVVAGG SSFKAKGFDS LTDNLGVSGW MMYAALLMGM
VVGNNIAYDG TAFTMHAIIG VKGLHDRLAN AIVWSVICAV YFAIIGVGVY VFLFFVANVQ
QNVNAVMFQT LCPIGIAFAS IGIGLISSCI AMYPVASIEK PFSRPQGSAG GRSFAAIGFM
LLSVVCMIPS VAAAIAFMIL APQLLWIASI LFVVNGLIVL VVGVILGGKV MDKRMIRIVE
NLRRFASITA
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