| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1134 |
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| Symbol | tilS |
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| ID | 8709526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1307837 |
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| End bp | 1308955 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483225 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_003374333 |
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| Protein GI | 283783579 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTATT CTTCTCGCAT ACGCGCAGGA ATTGGCGCAA TCAAGCATTG TTTTGACGAA
CTTTCATTAT GCGCACAAGA CGCGCGTTTT TCCGAACATG GCAATCACGC GACAGATGTT
GATGCTCCTT TGGTTCTTAT TGCGTGCTCT GGAGGTAGAG ATTCTCTTGC ACTTACAGCA
TTGAGCGTGA TTGTGTGCGC AAGTAGGGGT ATTCGTTGCG GTGTCGTAAT AGTAGATCAC
CATTTGCAGC CGCACTCAAC TGAAATTGCT AATATTGCGG CTAAGCATTG TTTGCAATCT
GGAATAGATG AAAAGTACGT GTATATTCAA TCTGTGAACG TTGAAGATTC GGGAGAAGGC
GAAGAGTCTG CTGCTAGAAA TGCTAGGTAT CAAGCAATTA TTGAGGTTGC TAAAAAGCAG
CAAGCTGCAG CCGTGCTTCT AGCTCATACT GCAAATGATC AAGCAGAAAC TGTAATGATG
GGGCTAAAAG ATTCTGCAGG TTTAGAAGCA GTTGCTGGCA TGAAAGCAGT GACATTGCGT
CAAAACGTGC TTTTTGCAAG GCCTCTTATT AAGCTTAGTA GAGAAGATAC TACTGGTATT
TGCGAGGATT TAGGCATTTC ATGGTGGGAT GATCCTACAA ATGGTGACGA TATTTCGAAA
AATGAGGAAC TTTCAGAAAA TTATCCATTG AGATCTCGAG TTAGACACAC GTTAATGCCT
TATATTTCGC GATTTTTTAA TGCAAATATG GTTACTTTGC TTTCTCGTGG AGCTGAAATA
GCTAGAGACG ATCTTGACTA TATTAATTCT CAAGTTGACG AAGCTAGTTC ACAAGTGATG
GAATTTGATA AAAATGCGAA AACTGTTAGG TTAAAAGCTG AGAAGTTAGC GCAATATCAT
CCATCAATTC GTAAACGAAT TATAGTGCGT GCGTTAAGCG AGCTTGGTCT GCGTTTCTCG
TCAAGTCACA TATCGGCAGT GGACGAACTA TGTACAAAAT GGCATGGTCA GAAGCCTTTT
TCGCTGCCAA ATTATTACGA AGCGACTCGG CTCTCGCGCA ATATCGTCAT TCGCTTATGC
AAAGATAGTG AACATGCAAA TTGCAGATAT GCGAGATGA
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| Protein sequence | MVYSSRIRAG IGAIKHCFDE LSLCAQDARF SEHGNHATDV DAPLVLIACS GGRDSLALTA
LSVIVCASRG IRCGVVIVDH HLQPHSTEIA NIAAKHCLQS GIDEKYVYIQ SVNVEDSGEG
EESAARNARY QAIIEVAKKQ QAAAVLLAHT ANDQAETVMM GLKDSAGLEA VAGMKAVTLR
QNVLFARPLI KLSREDTTGI CEDLGISWWD DPTNGDDISK NEELSENYPL RSRVRHTLMP
YISRFFNANM VTLLSRGAEI ARDDLDYINS QVDEASSQVM EFDKNAKTVR LKAEKLAQYH
PSIRKRIIVR ALSELGLRFS SSHISAVDEL CTKWHGQKPF SLPNYYEATR LSRNIVIRLC
KDSEHANCRY AR
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