Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1133 |
Symbol | hpt |
ID | 8709224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1307308 |
End bp | 1307868 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646483224 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_003374332 |
Protein GI | 283783578 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACATGC AAATTGCAGA TATGCGAGAT GACATCGACT ATGAATTAAT TAGCCACGAA GACCTTATGA AGCGTATTCG TGAAGTCGCT AAACAAGTAA GTGAAGATTA CAAAAACAGT AATGTTTTGC TTGTTGCAGT TCTCAAAGGT GCTGTAAATA CTCTTGCTGT ATTTTCGCAA GAATTAAGCA TTAACGCATC AATGGACTTT ATGAGCTTGT CTAGTTACGG CAGTGGCACT CAAACTAGCG GACAAATCAC TGTTCGCGAA GATTTAAGTA CTGATGTGCG TGGTCGAGAT GTGCTTATTG TAGAAGACAT TGTTGATTCC GGTCGCACGC TAGCTTGGCT TGTAGATGAG CTAAAAGGTC GTGGTGCTGC AAGTGTAAAA GTTTTTGCAT TGCTCAGTAA GCCTGCACGT CGCGAAGTAG ACGTACAAAT CGACTACTCG GGCTTTGAAA TTCCTGATGC ATTTGTCGTT GGTTTCGGAA TGGACTACGA CGAACGCTAC CGCAATCTCA ATAGTATTGC GGTATTAAAG CCATCAGTGT ATGGTGCTTG A
|
Protein sequence | MNMQIADMRD DIDYELISHE DLMKRIREVA KQVSEDYKNS NVLLVAVLKG AVNTLAVFSQ ELSINASMDF MSLSSYGSGT QTSGQITVRE DLSTDVRGRD VLIVEDIVDS GRTLAWLVDE LKGRGAASVK VFALLSKPAR REVDVQIDYS GFEIPDAFVV GFGMDYDERY RNLNSIAVLK PSVYGA
|
| |