Gene HMPREF0424_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_1133 
Symbolhpt 
ID8709224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp1307308 
End bp1307868 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID646483224 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003374332 
Protein GI283783578 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATGC AAATTGCAGA TATGCGAGAT GACATCGACT ATGAATTAAT TAGCCACGAA 
GACCTTATGA AGCGTATTCG TGAAGTCGCT AAACAAGTAA GTGAAGATTA CAAAAACAGT
AATGTTTTGC TTGTTGCAGT TCTCAAAGGT GCTGTAAATA CTCTTGCTGT ATTTTCGCAA
GAATTAAGCA TTAACGCATC AATGGACTTT ATGAGCTTGT CTAGTTACGG CAGTGGCACT
CAAACTAGCG GACAAATCAC TGTTCGCGAA GATTTAAGTA CTGATGTGCG TGGTCGAGAT
GTGCTTATTG TAGAAGACAT TGTTGATTCC GGTCGCACGC TAGCTTGGCT TGTAGATGAG
CTAAAAGGTC GTGGTGCTGC AAGTGTAAAA GTTTTTGCAT TGCTCAGTAA GCCTGCACGT
CGCGAAGTAG ACGTACAAAT CGACTACTCG GGCTTTGAAA TTCCTGATGC ATTTGTCGTT
GGTTTCGGAA TGGACTACGA CGAACGCTAC CGCAATCTCA ATAGTATTGC GGTATTAAAG
CCATCAGTGT ATGGTGCTTG A
 
Protein sequence
MNMQIADMRD DIDYELISHE DLMKRIREVA KQVSEDYKNS NVLLVAVLKG AVNTLAVFSQ 
ELSINASMDF MSLSSYGSGT QTSGQITVRE DLSTDVRGRD VLIVEDIVDS GRTLAWLVDE
LKGRGAASVK VFALLSKPAR REVDVQIDYS GFEIPDAFVV GFGMDYDERY RNLNSIAVLK
PSVYGA