Gene HMPREF0424_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_1112 
SymbolglnA_1 
ID8709703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp1279057 
End bp1280394 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content47% 
IMG OID646483203 
Productglutamine synthetase, type I 
Protein accessionYP_003374313 
Protein GI283783559 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.729434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAC AACAAGAGTT TGCTCTACGT ACTGTTGAAG AGCGAGACGT GCGTTTTATT 
CGACTCTGGT TTACGGACGT CTTAGGCACG CTTAAATCCG TTGCTATTGC CCCTGCTGAA
TTAGAAGCAG CTTTTGAAGA GGGAATAGGG TTCGACGGCT CAGCAATAGA AGGCATGACT
CGCGTCCTAG AAGACGATAT GATTGTGAAG CCGGATCCGT CGACGTTCCA AATTCTTCCA
TGGCATGGAG GTCCGGAAGG CACAGCGCGC ATGTTCTGCG ATGTGCTAAC TCCAGACGGA
GAGCCTTCAC TGGGAGACCC TCGTCACGTT TTGAAGACTG CGCTCGCAAA AGCGAAAGAA
AAAGGATTTA CTTTCTACGT TCATCCGGAA ATTGAGTTTT ATTTGTTTGA AGCTCAAGAT
GATTGGTCCA AAGCTCCTGT GCCGATTGAT GAGGGTGGCT ATTTTGACCA CGTTCCTAGA
AGTTCGGCTA TGGATTTCCG TCGTAGTGCA GTTAGTATGC TTGAGCAAAT GGGTATTTCT
GTAGAATACT CGCATCACGA GGGCGGTCCT GGTCAAAACG AAATTGACTT GCGTTATGCA
GATGCTCTTA CTACCGCGGA CAATATTATG ACTTTCCGCA CTGTAGTTAA GGAAATTTCT
CTTGAGCGCG GAATGTATGC AAGCTTTATG CCAAAGCCGC TAACTGATCA GCCTGGATCG
GGTATGCATA CGCATTTGAG TTTGTTCGAA GGTGACACGA ACGCTTTTTA TGAGGCAGGT
CAAGAATTTA ATATGTCTCT TATTGCGCGT CAATTTGCGG CTGGTATTTT GCATCATGCT
TCAGAAATTT GTGCTGTAAC TGATCAATAC GTGAACTCTT ACAAGCGTTT GTGGGGTGGT
GCGGAAGCTC CTAGCTACGT TTGCTGGGGT CATAGCAACC GTTCTGCACT TCTGCGTGTG
CCGCAATACA AGCCTGGTAA AGGCAATTCT TGCCGAATGG AATTCCGTGC GCTAGATCCT
GTGGCGAATC CGTATCTTGC TTACTCTGTG CTTCTTGCTG CTGGTTTGGA TGGTATTGAA
AAGCAAATGA CTTTGTGCGA TCCAACTAGC GACGATGTGT GGGAGCTTAC TGATGCTGAG
CGTCAAGCAA TGGGTATTCA GCCATTGCCG GAATCCTTGG ATGAAGCACT AAAGATTATG
GAGCGCTCGG ACTTCGTTGC AAGCGTATTA GGTGAACACG CTTTTGAGTA CTTCTTGCGC
AATAAGCATC AAGAGTGGGA AGAGTACCGT CGTCAGGTTA CGCCTTTTGA GCTTGAGAAG
TATTTGCCGC GTTTGTAG
 
Protein sequence
MDRQQEFALR TVEERDVRFI RLWFTDVLGT LKSVAIAPAE LEAAFEEGIG FDGSAIEGMT 
RVLEDDMIVK PDPSTFQILP WHGGPEGTAR MFCDVLTPDG EPSLGDPRHV LKTALAKAKE
KGFTFYVHPE IEFYLFEAQD DWSKAPVPID EGGYFDHVPR SSAMDFRRSA VSMLEQMGIS
VEYSHHEGGP GQNEIDLRYA DALTTADNIM TFRTVVKEIS LERGMYASFM PKPLTDQPGS
GMHTHLSLFE GDTNAFYEAG QEFNMSLIAR QFAAGILHHA SEICAVTDQY VNSYKRLWGG
AEAPSYVCWG HSNRSALLRV PQYKPGKGNS CRMEFRALDP VANPYLAYSV LLAAGLDGIE
KQMTLCDPTS DDVWELTDAE RQAMGIQPLP ESLDEALKIM ERSDFVASVL GEHAFEYFLR
NKHQEWEEYR RQVTPFELEK YLPRL