Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1112 |
Symbol | glnA_1 |
ID | 8709703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1279057 |
End bp | 1280394 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646483203 |
Product | glutamine synthetase, type I |
Protein accession | YP_003374313 |
Protein GI | 283783559 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.729434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGAC AACAAGAGTT TGCTCTACGT ACTGTTGAAG AGCGAGACGT GCGTTTTATT CGACTCTGGT TTACGGACGT CTTAGGCACG CTTAAATCCG TTGCTATTGC CCCTGCTGAA TTAGAAGCAG CTTTTGAAGA GGGAATAGGG TTCGACGGCT CAGCAATAGA AGGCATGACT CGCGTCCTAG AAGACGATAT GATTGTGAAG CCGGATCCGT CGACGTTCCA AATTCTTCCA TGGCATGGAG GTCCGGAAGG CACAGCGCGC ATGTTCTGCG ATGTGCTAAC TCCAGACGGA GAGCCTTCAC TGGGAGACCC TCGTCACGTT TTGAAGACTG CGCTCGCAAA AGCGAAAGAA AAAGGATTTA CTTTCTACGT TCATCCGGAA ATTGAGTTTT ATTTGTTTGA AGCTCAAGAT GATTGGTCCA AAGCTCCTGT GCCGATTGAT GAGGGTGGCT ATTTTGACCA CGTTCCTAGA AGTTCGGCTA TGGATTTCCG TCGTAGTGCA GTTAGTATGC TTGAGCAAAT GGGTATTTCT GTAGAATACT CGCATCACGA GGGCGGTCCT GGTCAAAACG AAATTGACTT GCGTTATGCA GATGCTCTTA CTACCGCGGA CAATATTATG ACTTTCCGCA CTGTAGTTAA GGAAATTTCT CTTGAGCGCG GAATGTATGC AAGCTTTATG CCAAAGCCGC TAACTGATCA GCCTGGATCG GGTATGCATA CGCATTTGAG TTTGTTCGAA GGTGACACGA ACGCTTTTTA TGAGGCAGGT CAAGAATTTA ATATGTCTCT TATTGCGCGT CAATTTGCGG CTGGTATTTT GCATCATGCT TCAGAAATTT GTGCTGTAAC TGATCAATAC GTGAACTCTT ACAAGCGTTT GTGGGGTGGT GCGGAAGCTC CTAGCTACGT TTGCTGGGGT CATAGCAACC GTTCTGCACT TCTGCGTGTG CCGCAATACA AGCCTGGTAA AGGCAATTCT TGCCGAATGG AATTCCGTGC GCTAGATCCT GTGGCGAATC CGTATCTTGC TTACTCTGTG CTTCTTGCTG CTGGTTTGGA TGGTATTGAA AAGCAAATGA CTTTGTGCGA TCCAACTAGC GACGATGTGT GGGAGCTTAC TGATGCTGAG CGTCAAGCAA TGGGTATTCA GCCATTGCCG GAATCCTTGG ATGAAGCACT AAAGATTATG GAGCGCTCGG ACTTCGTTGC AAGCGTATTA GGTGAACACG CTTTTGAGTA CTTCTTGCGC AATAAGCATC AAGAGTGGGA AGAGTACCGT CGTCAGGTTA CGCCTTTTGA GCTTGAGAAG TATTTGCCGC GTTTGTAG
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Protein sequence | MDRQQEFALR TVEERDVRFI RLWFTDVLGT LKSVAIAPAE LEAAFEEGIG FDGSAIEGMT RVLEDDMIVK PDPSTFQILP WHGGPEGTAR MFCDVLTPDG EPSLGDPRHV LKTALAKAKE KGFTFYVHPE IEFYLFEAQD DWSKAPVPID EGGYFDHVPR SSAMDFRRSA VSMLEQMGIS VEYSHHEGGP GQNEIDLRYA DALTTADNIM TFRTVVKEIS LERGMYASFM PKPLTDQPGS GMHTHLSLFE GDTNAFYEAG QEFNMSLIAR QFAAGILHHA SEICAVTDQY VNSYKRLWGG AEAPSYVCWG HSNRSALLRV PQYKPGKGNS CRMEFRALDP VANPYLAYSV LLAAGLDGIE KQMTLCDPTS DDVWELTDAE RQAMGIQPLP ESLDEALKIM ERSDFVASVL GEHAFEYFLR NKHQEWEEYR RQVTPFELEK YLPRL
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