| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1101 |
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| Symbol | |
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| ID | 8709591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1265534 |
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| End bp | 1266733 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483192 |
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| Product | putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
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| Protein accession | YP_003374302 |
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| Protein GI | 283783548 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG ATAATGCTAT TGAGCATGAA GTGCATATTG TTCTTGCAGG CGGGGGCACT
GCAGGTCATG TCAATCCTTT GCTTTCTGTC GCAAACGCTA TTAAAAAGCT CAATCCTGAA
GCGTTAATTA GTGTAATTGG CACAGAAGTT GGTTTGGAAA AAAGTCTTGT TCCGAATGCA
GGGTACGAAC TTGACACTAT AGAAAAAGTG CCGTTCCCGC GTAAGCCAAA TCTAGATGCA
ATTAAGTTTC CAATTCGATG GATGCGCGAA AAACGCAAAG TGCGAAATAT ACTAGCCGCT
AGAAAAGCAG ATATAGTAGT GGGCTTCGGT GGCTATGCTT CTGCTCCAGT ATATTCTCAA
GCTCATGCGC AGCATATTCC TATTGTGATT CACGAGCAGA ATGCTAAATC TGGAATGGCA
AATCGCTTGG GCGCAAGTTG GGCTGATGCT GTTGGAACAG TTTATGGGAA TACTGATTTG
CGCACACGAA AAGGTGTCAA AGTTGAAAGA GTTGGTTTAC CTCTTAGACC TGCTATTTCT
CAATTGTGTG AAAGATTAGA AAAAGATTAT GATTCCGCTC GCGTTGAAGG TGCGCAAAAA
CTTGGCGTTG ACCCTAAACG TCCAATTATT CTTGTTACTG GCGGATCTTT GGGTGCAAAA
AGCATAAATC AAGCTGTTGC TGCAGCAGCA GGAGATATTT TAAAACATGC GCAAGTAATT
CACTTAACTG GTCGCGCAAA AGCGGAAGAA GTACGAAATA TAGTTGCAAA GCAAGTAGGC
GAATCGCAAA TAAATGATAT TAAACCAGAG CATGCTGGTT GTGGCGATTA TCATATTGCA
GAATATTTAG AGCGTATTGA TTGGGCTTTT GCTTGTGCAG ATTTAGTTAT ATGTCGTGCA
GGAGCTGGAA CGGTTGCAGA AATTTCTGCA CTTGGCTTAC CTGCTGTATA CGTGCCATTG
CCTATTGGCA ACGGCGAGCA GCGTTTCAAT GTTGAGCCTG TAGTAAATGC AGGGGGAGCA
TTAATGGTAA ATGATGCTGA TTTCAATGCG AAGTGGTTTA TAGATGAAGG ATTAGCTTTA
TTGCAAAACA AAAAGCAATT ACAAGCTATG CGCACTAAAT CTTGGAATTA TGGTATTCGT
GATGCTGCAG ACGTTATGGC GAAGCGTATT CTTGAAATCG CAAAAGAAGG CAGAAAGTAA
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| Protein sequence | MKFDNAIEHE VHIVLAGGGT AGHVNPLLSV ANAIKKLNPE ALISVIGTEV GLEKSLVPNA
GYELDTIEKV PFPRKPNLDA IKFPIRWMRE KRKVRNILAA RKADIVVGFG GYASAPVYSQ
AHAQHIPIVI HEQNAKSGMA NRLGASWADA VGTVYGNTDL RTRKGVKVER VGLPLRPAIS
QLCERLEKDY DSARVEGAQK LGVDPKRPII LVTGGSLGAK SINQAVAAAA GDILKHAQVI
HLTGRAKAEE VRNIVAKQVG ESQINDIKPE HAGCGDYHIA EYLERIDWAF ACADLVICRA
GAGTVAEISA LGLPAVYVPL PIGNGEQRFN VEPVVNAGGA LMVNDADFNA KWFIDEGLAL
LQNKKQLQAM RTKSWNYGIR DAADVMAKRI LEIAKEGRK
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