| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1100 |
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| Symbol | murC |
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| ID | 8709953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1263972 |
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| End bp | 1265534 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483191 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_003374301 |
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| Protein GI | 283783547 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATC TTAATAGCAA TACAACTTCA TCTCATAATA ATATTGATTT AAACCCAGTA
AAATCAGCAT TTGATGATTC GCAAACTATT TCAAAACTAG GGCGAGTGCA TTTTATTGGC
ATTGGCGGAG CTGGAATGAG TGTTCTGGCA GAAATGTTGC ATGAAGAGGA CGTAAGCGTA
AGCGGTTGCG ATCGTGAAGC AAATGATCAC ACTCAACGCT TGGAAGAATT AGGTATTGAA
GTAGAAATTG GACAAAGTGC TTCACATGTT GAGCATGCAG ATGTACTCGT GTATTCAAGT
GCTATTAAAC CGAGCAATCC GGAGATTATG GCAGCACATG AGCGCGGCAT AAAACTTGTT
CATCGCAGCG ATATTCTTGC GTTATTATTA TCTGCAAAAA CTGGTGTGAC TGTTGCTGGA
GCGCATGGTA AAACAACTAC TAGCTCACTT CTTTCTCATA TATTAACTGT GGCTGCAGTA
GGCGATTTGG CTGATCCAAG CTACGCAATC GGCGGATCTA TTCAAGCCGC AGACGGAACA
GTTTTAGACG GCGGTCATGC TGGTAATGGA ATTGTTATGG TTGCTGAAGC TGACGAATCT
GACGGAAGTT TTGAAAAATA CAGTCCAAGT ATTGCAATCG TAACAAATGC TGAAGCAGAT
CACTTGGATC ATTACGGCTC TAGTGAACGA TACAGAGAAG CATTTGTTGA GCACGTAAGT
CATGCTGTTA ATAACGTAAT AATTTGTGCA GAAGACGAAG GTGCTAGAAA AGTACTTGAA
GCTATGCCGG ATAATATTTT AAACAAAACA ATTGCTTACG GTAATTTGGA TACTTGGAGC
CTAAAACTCA GCTCGCGCGT ACAAAAATTA GCTATCTTCG CAAGTATTGA GCATGAAAAT
GAGCAAGCTG TAAGTGGTCG CGAAATGTTT ACGCTTGTAT TGCCAGAAAA AATTTTGGAT
GAGCATACTA AATGTTCGAA CAAGGTGCAA GTTAGCTTGT TAATACCAGG TTTGCATAAT
GCTCTTAATG CTTCTGCAGC TATTGTTGCT GCAGTATTGC TCGGTATGAA TCCAGAAAAT
GCGGCTCGTG GTGCAGAAAG CTTCCGAGGT GCGTCTCGTC GTTTTGATAT TCGTGGATGT
GTTGATGGTG TAACAGTTGT GGACGATTAT GCTCACCATC CAACTGAAAT AGCTGCATTA
TTGCGCGCTG CTCGAAGAAA GTACACTTCT TCTACTCTTC GCGTGCTGTT TCAGCCTCAT
TTGTTCTCCA GAACGCAGGC TTTTGCTAAT GAGTTTGCAA AATCTTTGGC TCTTGCAGAC
GATGTAATTG TTACAGGAAT TTTCCCAGCT CGCGAAAAGC AGGAAGATTT TCCAAATATT
AATGCTGAAA CTATTGTTAA AGCTGCAAAA TCACAGAATC TTGATGTAAA AATTGAAGCG
GTTGACGATA TGCGCGCAGC TGCGTTGAAA CTGGCTTTGC GTGCAAAATC TGGTGATGTG
CTGCTTACAG TTGGTGCAGG AAGTATTACT GCTATGACGT CTGTTATGCT AGAAGCATTG
TAG
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| Protein sequence | MTNLNSNTTS SHNNIDLNPV KSAFDDSQTI SKLGRVHFIG IGGAGMSVLA EMLHEEDVSV
SGCDREANDH TQRLEELGIE VEIGQSASHV EHADVLVYSS AIKPSNPEIM AAHERGIKLV
HRSDILALLL SAKTGVTVAG AHGKTTTSSL LSHILTVAAV GDLADPSYAI GGSIQAADGT
VLDGGHAGNG IVMVAEADES DGSFEKYSPS IAIVTNAEAD HLDHYGSSER YREAFVEHVS
HAVNNVIICA EDEGARKVLE AMPDNILNKT IAYGNLDTWS LKLSSRVQKL AIFASIEHEN
EQAVSGREMF TLVLPEKILD EHTKCSNKVQ VSLLIPGLHN ALNASAAIVA AVLLGMNPEN
AARGAESFRG ASRRFDIRGC VDGVTVVDDY AHHPTEIAAL LRAARRKYTS STLRVLFQPH
LFSRTQAFAN EFAKSLALAD DVIVTGIFPA REKQEDFPNI NAETIVKAAK SQNLDVKIEA
VDDMRAAALK LALRAKSGDV LLTVGAGSIT AMTSVMLEAL
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