Gene HMPREF0424_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_1097 
SymbolrpsG 
ID8708888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp1261568 
End bp1262038 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID646483188 
Productribosomal protein S7 
Protein accessionYP_003374298 
Protein GI283783544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTA AAGGACCTGC AAAAAAGCAT CAACTGCTTC CTGATCCAAT CTACGGCTCG 
ACCGTCGTGG CTCAGTTGAT TAACAAAATC CTTCTCGATG GTAAGAAGTC CATCGCAGAA 
AACATCGTCT ACACCGCTCT TGAGCAGGTG AAGGCAAAGA CCGAGCAGGA GCCAGTTTCT 
GTATTGAAGC GCGCTCTTGA TAACATTCGT CCAAATCTTG AGGTTCGTTC TCGCCGCGTT 
GGTGGTGCAA CTTATCAGGT TCCAGTCGAA GTTAAGCCTG CTCGCGCAAA CACTCTTTCC 
CTCCGCTGGC TTACTGACTT CTCACGCGCT CGTCGTGAAA AGACTATGGC TGAGCGCTTG 
GCCAACGAAA TTCTCGATGC CTCCAATGGC TTGGGTGCTT CCGTGAAGCG CCGCGAGGAT 
ACCCACAAGA TGGCAGAAGC AAACAAGGCT TTTGCTCACT ATCGCTGGTA A
 
Protein sequence
MSRKGPAKKH QLLPDPIYGS TVVAQLINKI LLDGKKSIAE NIVYTALEQV KAKTEQEPVS 
VLKRALDNIR PNLEVRSRRV GGATYQVPVE VKPARANTLS LRWLTDFSRA RREKTMAERL 
ANEILDASNG LGASVKRRED THKMAEANKA FAHYRW