| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1082 |
|---|
| Symbol | guaB |
|---|
| ID | 8708905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | - |
|---|
| Start bp | 1238495 |
|---|
| End bp | 1240039 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646483174 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_003374285 |
|---|
| Protein GI | 283783531 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAA CTGATATGAA CACGGAATCC GTGTATGCTC CTGTTCCACC AATTTTCGAG
AAGCTCGGTC TCGCTTATGA CGATGTCCTT TTGCTTCCAA ATGAAACTGA TGTTATTCCG
TCCGAAGTGG ATACTTCCAC TCGTCTGACT CGCGAAATTA CCATGAAAGT ACCGACTATT
TCGGCAGCTA TGGATACTGT TACCGAGTCT GATATGGCTA TTGCCATGGC GCGTAACGGT
GGTATTGGAG TACTTCACCG CAATCTTTCT ATTGATGATC AAGCTGCGCA GGTTGATATT
GTTAAGCGCA GTGAATCTGG TATGATTACC GACCCACTTA CTGTTCACCC AGATGCTACG
CTCGCCGATT TAGATAAATT GTGCGGGCGT TTCCATATTT CTGGTCTTCC GGTAGTGGAT
AGCGAAAATC GTTTAGTTGG TATTATTACC AACCGCGATA TGCGTTTCAT TGCTTCCGAA
GACTACGATC GCTTGAAAGT TAAGGACGTG ATGACGCGCG AAAATCTCGT CACCGGTCCT
TCAAATATTT CTAAGGAAGA TGCTCACCGC TTGCTTGCGG ATAACAAGAT TGAAAAGTTG
CCTTTGGTTG ATGCTGAAGG TAAGCTTACA GGCTTGATTA CTGTTAAGGA CTTTGTGAAG
ACTGAACAGT ATCCGGATGC TACTAAGGAT GATCAGGGTC GCTTGCGCGT TGCTGCTGGC
ATTGGCTTCT TGGGTGATGC TTGGCAGCGT GCGTGCGCTC TTATGGAAGC TGGAGTTGAC
GTGCTTGTGG TCGATACCGC AAACGGCGAG GCTCGCTTGG CTCTCGACAT GATTCGTCGC
ATTAAGGCAG ATAAGGCTTT CGACGGCGTG CAAATTATTG GCGGAAATAT TGCAACTCGC
CAAGGCGCAC AGGCTATGAT TGACGCTGGC GTTGACGCTG TAAAGGTTGG CGTTGGTCCA
GGCTCTATTT GCACTACGCG TGTTGTTGCA GGCGTTGGCG TGCCTCAGCT TACCGCAGTT
TACGATGCGG CTCAGGCTTG CAAGGCTGCT GGAATTCCAT GCATTGCAGA CGGTGGTATT
CACTATTCCG GCGATATTGC TAAGGCTTTG GTTGCAGGCG CGGACACTGT TATGCTCGGC
GGCACTTTGG CTGGATGTGA GGAAGCTCCA GGCGAGAAGG TTCTTCTTCA CGGCAAGCAG
TACAAGCTTT ACCGCGGCAT GGGCTCGCTT GGTGCAATGG CTCCTCGCGG TAAGAAGTCT
TATTCGAAGG ATCGTTACTT CCAGGCAGAC GTTACCAGCT CCGACAAGGT GGTTCCAGAA
GGCGTTGAAG GCGAAGTTCC ATATCGCGGT CCGCTTAACG CTGTGCTTTA CCAGCTTCTC
GGCGGCTTAC ACCAGTCAAT GTTCTACGTT GGTGCGCACA ATATTAAGGA AATGCAAGAG
CGCGGCCGCT TTATTCGCAT TACTGATGCT GGCCTTCGCG AATCTCATCC TCACGATATT
GTGATGACTG CAGAAGCACC AAACTACAGC GGTTTCCACA ACTAA
|
|---|
| Protein sequence | MATTDMNTES VYAPVPPIFE KLGLAYDDVL LLPNETDVIP SEVDTSTRLT REITMKVPTI
SAAMDTVTES DMAIAMARNG GIGVLHRNLS IDDQAAQVDI VKRSESGMIT DPLTVHPDAT
LADLDKLCGR FHISGLPVVD SENRLVGIIT NRDMRFIASE DYDRLKVKDV MTRENLVTGP
SNISKEDAHR LLADNKIEKL PLVDAEGKLT GLITVKDFVK TEQYPDATKD DQGRLRVAAG
IGFLGDAWQR ACALMEAGVD VLVVDTANGE ARLALDMIRR IKADKAFDGV QIIGGNIATR
QGAQAMIDAG VDAVKVGVGP GSICTTRVVA GVGVPQLTAV YDAAQACKAA GIPCIADGGI
HYSGDIAKAL VAGADTVMLG GTLAGCEEAP GEKVLLHGKQ YKLYRGMGSL GAMAPRGKKS
YSKDRYFQAD VTSSDKVVPE GVEGEVPYRG PLNAVLYQLL GGLHQSMFYV GAHNIKEMQE
RGRFIRITDA GLRESHPHDI VMTAEAPNYS GFHN
|
|---|
| |