| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1051 |
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| Symbol | |
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| ID | 8709420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1196759 |
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| End bp | 1198042 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483143 |
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| Product | putative dGTPase |
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| Protein accession | YP_003374254 |
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| Protein GI | 283783500 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0232] dGTP triphosphohydrolase |
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| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.937952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAACG AAGTAATTGC ATCGGATAAT GAGATCGTTG GCGAATACAA TTTGCATGAT
ACTGAGCGCT GGGCGAGTGA GCCTCATCAC ACTCGTGTGA GAACGCCTTT TGAACGAGAT
CGTGCGCGAA TCATACACTC GTCTGCGCTT CGTCGATTGG GTGCAAAAAG CCAGGTTTTA
GTTGCAGGTT CGGATGATTT TGCTCGCACT CGATTGACGC ATACTTTGGA AGTTGCGCAA
ATTGGTAGGC AAATTGCAGC AATGCTTGGA TGCGATCCAG ATGTTGTTGA TTGCGCTTGC
TTATCGCATG ACTTAGGGCA CCCACCATTT GGTCATAACG GGGAACGCGC ACTCGCAGAA
TTAGCGAAAA ATATTGGTGG ATTTGAAGGA AACGCACAAA CTCTTCGCTT ACTTACGCGC
TTGGAACCGA AAGTTTTTCG TGAAAACGGC AGTAGTGCAG GAGTAAATCT TACGCGCGCA
GCATTAGATG CTGCAGTGAA GTATCCGTGG GGATTAGAAG AAGCAAAAGC GCACGATAAA
GGCGAGCGTG ATTTGAAATT CTGTGTATAT CCGGATGATC GAGATGTGTT TGAATGGCTG
AAAATTGGTG CTCCATGCGA AGCAAAACCA ATGGAATGTC AAATAATGGA TCTTTCAGAC
GACATTGCTT ACAGTGTGCA TGATATTGAG GATGCGATTG TAACCGGCGC TTTTAATCCG
GCTTTAGTTG CAGATTCAAA AGTTGTAGAT GAAGTTATTG AAGAAACCCA CGCATGGTAT
GGTGAGCGTT GGGATGTAGA TAAACTTTTG GATGCTTTGA AACGTTTGCG CTCGCTTCAC
ATGTTTCCTA ATTCTTTCGA CGGTTCTCGT CGAGCGCTAG CGCAGTTGAA AAATATTACT
AGTGCTCTTA TTGGTCGTTT TGCAAGCTCT GTTGAGCACG CTACGCGTGA GCGTTATGGC
AACGGTCCGC TTGTTCGCTA CCGAGCAAAC CTTGTGATTC CGGAAAATAC TTCCTACGAA
ATTGTGATGC TGAAAAGCTT AGCTGTGCAC TTTATAATCG CCCCTCGAGA GCGTGAAGTT
TATAAGCGCG AACAGAAAAT TTTGACAGAT TTAGTAGAAG TATTTATGAG CAAGTCGCCG
CGCTCGCACG ATGCAATGGA GGAAGTATTC GTGGGAGATT GGAACGAGTG CACTAACGAT
GATGAGCGTC TTCGTGTTGC AATCGACCAA GTAGCAAGTC TTACAGACGG TTCTGCTACA
ACTCTTCACG CGGCTTTGTG CTAA
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| Protein sequence | MCNEVIASDN EIVGEYNLHD TERWASEPHH TRVRTPFERD RARIIHSSAL RRLGAKSQVL
VAGSDDFART RLTHTLEVAQ IGRQIAAMLG CDPDVVDCAC LSHDLGHPPF GHNGERALAE
LAKNIGGFEG NAQTLRLLTR LEPKVFRENG SSAGVNLTRA ALDAAVKYPW GLEEAKAHDK
GERDLKFCVY PDDRDVFEWL KIGAPCEAKP MECQIMDLSD DIAYSVHDIE DAIVTGAFNP
ALVADSKVVD EVIEETHAWY GERWDVDKLL DALKRLRSLH MFPNSFDGSR RALAQLKNIT
SALIGRFASS VEHATRERYG NGPLVRYRAN LVIPENTSYE IVMLKSLAVH FIIAPREREV
YKREQKILTD LVEVFMSKSP RSHDAMEEVF VGDWNECTND DERLRVAIDQ VASLTDGSAT
TLHAALC
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