| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1048 |
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| Symbol | |
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| ID | 8708798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1190492 |
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| End bp | 1191337 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 646483140 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003374251 |
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| Protein GI | 283783497 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CAATTAAATT GGACGATGTA AGTTTTCAAT ATCCTTCAAA TGAAAAAATA
AAAAATAAGA ACAATAATAA ACAAGAAAAA TCATGCAAAA TTCTAAAACA CGTAAATGTA
GAATTCGAAA GTGGTGAAGT ATGCGCAATA ATAGGTAGCA ATGGAGCAGG GAAAAGCACT
TTAGCCAGAA TAATAGACAA TTTATTACAG CCAACTTCTG GTGACATAAC TATCGAAGGA
AAACAATATA AAACATTAAA GCAACACGAT ATTACATCAC TCGTTGGTTA TATTTTTCAG
AATCCAAATG ATCAAATTTT TAACAGCACT GTGCATAAAG AGATTACATA TGGGATAAAG
AATATAAACA ATGATCTTTA CCGTCGCATT GTGAATCTTA CTGGTTTAAA CGATAAAGAA
AATACAAACC CATTTAATTT GTCATTCTCT GAAAGAAAAT TTATTAACAT TGCATCTGCA
CTGCTAAGAG AACCACATAT TATTATTATG GATGAAGTGA CTGGCGGGTT GGATAAGCTA
CAAAAAATGC GACTTGTAAA AATACTTAAT TATTTACATA CGATAAATGT AACAGTATTA
TTTATTACCC ATGACATGGA ATTTGCATAC AAAAATTGTC AAAATGCTCT CATACTTGAT
AATGGAAATG TGCTATACAA AGGGAGCATC GAATCTGCAT TTCAGAATGT AGAAATAGTA
AGACGCGCGC ATATTGACCA ACCAATCATA GTGCAGATAA TGAATGCGCT CGAAATTAAC
TATATAAATA CAGATAATCC TATATGTGCT TTAGCTAAAT ATATTGCAAA TCGCAATAAT
CATTAA
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| Protein sequence | MSTAIKLDDV SFQYPSNEKI KNKNNNKQEK SCKILKHVNV EFESGEVCAI IGSNGAGKST
LARIIDNLLQ PTSGDITIEG KQYKTLKQHD ITSLVGYIFQ NPNDQIFNST VHKEITYGIK
NINNDLYRRI VNLTGLNDKE NTNPFNLSFS ERKFINIASA LLREPHIIIM DEVTGGLDKL
QKMRLVKILN YLHTINVTVL FITHDMEFAY KNCQNALILD NGNVLYKGSI ESAFQNVEIV
RRAHIDQPII VQIMNALEIN YINTDNPICA LAKYIANRNN H
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