| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1042 |
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| Symbol | |
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| ID | 8710058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1183640 |
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| End bp | 1184836 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483135 |
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| Product | citrate transporter |
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| Protein accession | YP_003374246 |
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| Protein GI | 283783492 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC GCTGGCTGTT GAATCTGGTC AAGTGTGAAA CCATTCTTAT TGTTGCCGCA
ATTTTAGCGG TTATTTCTTG TTTTTTTGTA CCTCTAGATC CGCAATATTT GAGTTATATT
CATGTCAACA CTATTTCGCA ATTAGTGTGT CTTATGATGG TTGTGTGCGG ATTCCAGCGC
ATTGGTGTGT TTCGATCTAT TGGTGCGCGT TTGCTAAGGC ATGTGCGCAC TGAGCGCGGC
TTGGTGCTCG TGCTTATGTC GTTAACATTC TTTTCAGCAA TGTGGATTAC GAACGACGTT
GCTTTGGTTA CTTTTGTGCC TTTTGCGCTA TCTGTGCTCG TAATGGCGAA TGCTGAAAAG
CAGTCAATTC TTGTAATTAC GCTTATGACC ATTGGTGCCA ATGTTGGAAG TATGCTCACT
CCTATTGGCA ATGCTCACAA TCTGTATTTA AAGGCGTTGA CTCATATGTC TACGCAAGAT
TTTTTGAAGA TTATGGCTCC TTATACGATT ACAGCAGCAC TGTTGATGAT CGTATTTGCA
TTCGTATTCT TTAAGTCGCG CACAGTTGAC CAGTTTGCAG GTTTGCATGG TGACGATATT
GAACAAAGCG TGTTGGCTCC TTCGCATGGT CATCCGCAGC CTGATGAAAT TCGTGTTATG
GGTTACGGCA TGAATTTTAC TCGCTGGCGT GTTGCTGTTT ATAGTTTGCT GTTTGTCGTT
TGCTTGTGTG GTGTTAGTGG ATGGATTCCT GACTGGATTA TGGTGCTTAT TATGGTTGCA
GCTTTTCTTG TTTGCGACCG CCACGTATTC CGTGTTTTAG ATTGGGCTTT GCCACTCACG
TTTATTATGT TCTTTGTTTT TATTGGCAAT ATGCGCCGAG TTTCTGGATT TAGCGATCTT
GCGCAAATGT GGGTTGGTGC GCATCCGATG GAAGTTTCTA TTGCTTCAAG CCAATTTATT
AGTAATGTAC CAACGACAAT TCTGCTTTCT GGATTCTGTG ATCAGTGGAA GCTTCTTATT
ATTGGCACGA ATCTTGGTGG AATGGGTACT TTGATTGCTT CTATGGCTTC GCTTATTTCT
TATAAGGGAA TTACGCACCA GTATTCGCAT TACCGTGGGC GTTATTTGCT CACGTATACT
ATTGTCAATG TGTTCTTTCT TGCAGTGTTG ATGTCACTTG CGTGGATTAT TGAATAA
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| Protein sequence | MMKRWLLNLV KCETILIVAA ILAVISCFFV PLDPQYLSYI HVNTISQLVC LMMVVCGFQR
IGVFRSIGAR LLRHVRTERG LVLVLMSLTF FSAMWITNDV ALVTFVPFAL SVLVMANAEK
QSILVITLMT IGANVGSMLT PIGNAHNLYL KALTHMSTQD FLKIMAPYTI TAALLMIVFA
FVFFKSRTVD QFAGLHGDDI EQSVLAPSHG HPQPDEIRVM GYGMNFTRWR VAVYSLLFVV
CLCGVSGWIP DWIMVLIMVA AFLVCDRHVF RVLDWALPLT FIMFFVFIGN MRRVSGFSDL
AQMWVGAHPM EVSIASSQFI SNVPTTILLS GFCDQWKLLI IGTNLGGMGT LIASMASLIS
YKGITHQYSH YRGRYLLTYT IVNVFFLAVL MSLAWIIE
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