| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1039 |
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| Symbol | purK |
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| ID | 8709661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1181765 |
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| End bp | 1182937 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483132 |
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| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
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| Protein accession | YP_003374244 |
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| Protein GI | 283783490 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCT TATCTGAAGT AACTAATGGT GCTGTTGAAC GTTTAATGCC AGGATCCACT
ATTGGAATTA TTGGCGGCGG CCAGTTAGGG CGCATGATGG CTATTGCAGC TCGCCATATG
GGTTTTCGTA TTGGTGTTCT TGACCCTACG CTTGACTGCC CTGTGTTCCA AGTAGCAGAT
TTGCAGGTTG AAGCTAATTA CGACGATCCT GAAGGCTTAC GTGAGCTTGC TGAACGTTGC
GATGTATTAA CTTACGAATT TGAAAATGTT AACGCAGACG CACTTGATAA AGTTCGTCAT
TTAACCGCAA TCCCACAAGG AACTGACCTG TTACGCGTAA CTCAAGATCG CGTCAGTGAA
AAAACGTTCA TTAATAGTCA TAAAATCGAA ACAGCTCCGT GGCGTGAAGT AAATAATTTG
GACGACTTAG ATGCTGCTAT TGACGAAATA GGCTTGCCAG CAATTCTTAA AACTCGTCGC
GGCGGCTACG ACGGTCATGG TCAAGATGTT TTGCGCACAG AAGAAGACGT TGCTAACATT
CACCATCGCT CGGATCGCGG AGGAAAATTC CCTCCTTCAA TTCTCGAGGG TTTCGTCGAT
TTTGCTTTTG AAGCATCAAT CCTGGTTTCT GGAAATGGTA AGGATTTCGT AACTTATCCT
CTAGTAAAAA ACGTGCATCA CAATAGTATT TTGCACATGA CTTTAGCTCC TGCAGTAGTT
GATCCTGAAG TTGAAAAAAC AGCTCACGAA TTAGCTTTGC GCTTAGCTAA AGGATTCGAA
CTAGCAGGAA CATTAGGAAT CGAGCTTTTC ATCACTAAAG ATAATCGCGT AGTAGTAAAC
GAACTTGCTC CTCGCCCTCA CAATTCCGGG CATTATACGA TTGAAGCTTG CGATATGGAT
CAATTTGAAG CACATATTCG CGGTATTGTT GGTTGGCCTT TAAAGAAGCC TAAGCTACTT
TCCCCTGCTG TTATGGTAAA TGTTCTTGGG CAACATGTGG CTCCTACACG TTCGCTGATT
TTGGAACATC CAGAATGGCA TATACATGAT TATGGAAAAG CTGAAGTTCG TAAGAATCGC
AAAATGGGTC ATATTACTGT GCTATGCGAT AATCCTGTTG ACGCTGCTGC AGCATTAGAT
GCAACAGGCT GCTGGGACGA CGAGCTAGAC TAA
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| Protein sequence | MPTLSEVTNG AVERLMPGST IGIIGGGQLG RMMAIAARHM GFRIGVLDPT LDCPVFQVAD
LQVEANYDDP EGLRELAERC DVLTYEFENV NADALDKVRH LTAIPQGTDL LRVTQDRVSE
KTFINSHKIE TAPWREVNNL DDLDAAIDEI GLPAILKTRR GGYDGHGQDV LRTEEDVANI
HHRSDRGGKF PPSILEGFVD FAFEASILVS GNGKDFVTYP LVKNVHHNSI LHMTLAPAVV
DPEVEKTAHE LALRLAKGFE LAGTLGIELF ITKDNRVVVN ELAPRPHNSG HYTIEACDMD
QFEAHIRGIV GWPLKKPKLL SPAVMVNVLG QHVAPTRSLI LEHPEWHIHD YGKAEVRKNR
KMGHITVLCD NPVDAAAALD ATGCWDDELD
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