Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1034 |
Symbol | purD |
ID | 8709892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 1173391 |
End bp | 1174662 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646483127 |
Product | phosphoribosylamine--glycine ligase |
Protein accession | YP_003374239 |
Protein GI | 283783485 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTT TAGTAGTTGG TTCTGGCGCT CGCGAACACG CTATTGCACA CGCGCTACTT AAAGGAGAAA GCGTTGAAGA AGTAACTGTT GCTCCTGGAA ATCCTGGTAT TACAGCAGAT GGCATTCAAA CTGCAAACAT AAATCAATCA GATCATGACG CTCTTATTAA GTTCGTTAAA GACAATAACT ACGATTTTGC GTTCATCGGT CCTGAAGTTC CCCTTATGAA TGGCATTGTT GACGATTTTG AAGCGCATGG AATTGCCGCT TTTGGTCCAA ACAAAGCCGC AGCTCAAATT GAAGGCTCTA AAGATTTCGC AAAAAAGCTT ATGGCTCGTC ACAACGTTCC AACCGCCTCC TACAAAACAT TTGACGCTTT GGAGACGGCA CGCGCATACG TTCTTGAGCA TGGTGCTCCA ATTGTTATTA AAGCGGACGG TTTGGCTGCT GGAAAAGGCG TTACTGTTGC TATGGATGAG CAAACAGCAG TTGATGCTTT GGAAGATATT TTCGTCGATC ATCGTTTTGG TCAAGCTGGA GCAAAAGTTG TTATTGAAGA ATTTTTGCAA GGCCAAGAGT TTTCACTTAT GAGTTTCGTA AGCGGAACTG ATTTTTGGGT TATGCCTATT TCTCAAGATC ACAAGCGTGC TTACGACGGC GACAAAGGAC CAAATACTGG AGGCATGGGA GCTTATAGCC CTGTGCCGCA AATTAGCAAC GAAACAGTTC AGCGTGCTAT CGACGAAATT GTGCGTCCAA CTGTCGAAGG ACTAGCTAAA GAGGGTACGC CTTTTACCGG CGTGCTTTAT GCTGGCTTAA TTGATACAGC AACAGGTCCT AAAGTTATTG AGTTTAATGC TCGCTTTGGA GACCCAGAAA CAGAAGTTGT GCTTCCTCGC CTTACTTCAG ATTTTGGTGC AGCTATATGG AATATTTTGC GACATAAAAG CCCAACTTTT ACTTGGAAAA ATAGCGGTGT TACGCTCGGC GTAATTATTG CAAGCGAAGG CTACCCTGGC ACTTTAGTTA CTGGAACTCA ACTTCCTCAA ATTCCTGTTG ACGAAAACCA AGGTCAGCAC GTGTATTATG CAGGAGTAAA AAGCGATGAA AAAAGCGGAA AACTTCTTAC TTCTTCAGGT AGAGTAGCTC TTGTACAAGT GCATGGAGAC GACGTAAAAG ACGCTCAAAA CAACGTCTAC AGCATATTAG ATAAACTTAA TCTTCCACAC ATGTTCTTTA GGCATGATAT TGCAGAAAAA GCTTTAAAAT AG
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Protein sequence | MKVLVVGSGA REHAIAHALL KGESVEEVTV APGNPGITAD GIQTANINQS DHDALIKFVK DNNYDFAFIG PEVPLMNGIV DDFEAHGIAA FGPNKAAAQI EGSKDFAKKL MARHNVPTAS YKTFDALETA RAYVLEHGAP IVIKADGLAA GKGVTVAMDE QTAVDALEDI FVDHRFGQAG AKVVIEEFLQ GQEFSLMSFV SGTDFWVMPI SQDHKRAYDG DKGPNTGGMG AYSPVPQISN ETVQRAIDEI VRPTVEGLAK EGTPFTGVLY AGLIDTATGP KVIEFNARFG DPETEVVLPR LTSDFGAAIW NILRHKSPTF TWKNSGVTLG VIIASEGYPG TLVTGTQLPQ IPVDENQGQH VYYAGVKSDE KSGKLLTSSG RVALVQVHGD DVKDAQNNVY SILDKLNLPH MFFRHDIAEK ALK
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