| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1033 |
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| Symbol | purM |
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| ID | 8709867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1172277 |
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| End bp | 1173311 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483126 |
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| Product | phosphoribosylformylglycinamidine cyclo-ligase |
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| Protein accession | YP_003374238 |
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| Protein GI | 283783484 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
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| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACATG CATATGAAGA AGCTGGCGTA AGCGTAGAAG CAGGATACGA AGTAGTACGT
CGTATTAAAT CTCATGTAAA TCGCACAAAG CGCCCAGGCG TTGTAGGTGG CATTGGCGGA
TTTGGCGGCT TATTTGATTT GGCGTCTCTT GGTTACAAAG AGCCAGTGCT GATTTCTGGC
ACGGATGGCG TTGGAACCAA GCTTGTGATT GCAAAAATGA TGAATAAGCA TAACACTATT
GGCATTGATT GCGTTGCAAT GTGCGTAAAC GATATTGCAG CTCAAGGTGC CGAGCCGCTT
TTCTTCCTCG ATTATATTGC ATGCGGAAAA AACAATCCTG AAATACTTGA GCAAGTAGTT
TCAGGCGTTG CAGACGGTTG CGTGCAATCA GAAGCAGGTT TAATTGGCGG CGAAACTGCT
GAAATGCCTG GAATGTATGA CGAAGACGAG TACGATCTTG CAGGTTTTGC AGTAGGCGTT
GCAGAACGTT CTAATATTGT TGATGGATCC ACTATTACTG CCGGCGACGT GCTTATCGGA
CTTCCTTCTT CAGGAGTTCA TTCAAACGGA TTCTCTCTTG TTCGCAAAGC TTTGTTTGAA
GAAGCAGGTT TTAGCGTTGA CACCAAGCTA GATGAGCTTA ATGGCAAAAC ACTTGGCGAA
GTTCTTCTTG AACCCACTCG AATCTACGTA AAAGCTTTAA AGCCACTTTT TGCTGAACAT
CTTATTAAGG GAGTTGCTCA TATTACAGGC GGCGGATTTA TTGAAAATGT TCCGCGCATG
TACGCAGATG ATTTAGCTGC AAAAATTGAT ACCACTAGCT GGAGCGTTCC ACCTATTTTT
GGCGTTATTG AACAAGCAGG CAAAGTTGCT CACGCTGAAA TGTTCAACGT TTTTAATATG
GGCATTGGCA TGGTTTTGGC AGTTGATGAA AGCCGAGCAA ACGAGGCAAT GCGAGTACTA
AACAAGCATG ACGAAACCGC TTATATTATT GGCAAAATGG CTAAGCGAGA AAACGTTGCA
GTTGAGTTGT TGTAA
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| Protein sequence | MPHAYEEAGV SVEAGYEVVR RIKSHVNRTK RPGVVGGIGG FGGLFDLASL GYKEPVLISG
TDGVGTKLVI AKMMNKHNTI GIDCVAMCVN DIAAQGAEPL FFLDYIACGK NNPEILEQVV
SGVADGCVQS EAGLIGGETA EMPGMYDEDE YDLAGFAVGV AERSNIVDGS TITAGDVLIG
LPSSGVHSNG FSLVRKALFE EAGFSVDTKL DELNGKTLGE VLLEPTRIYV KALKPLFAEH
LIKGVAHITG GGFIENVPRM YADDLAAKID TTSWSVPPIF GVIEQAGKVA HAEMFNVFNM
GIGMVLAVDE SRANEAMRVL NKHDETAYII GKMAKRENVA VELL
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