| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1024 |
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| Symbol | |
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| ID | 8709285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1154151 |
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| End bp | 1156850 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646483117 |
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| Product | FtsK/SpoIIIE family protein |
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| Protein accession | YP_003374230 |
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| Protein GI | 283783476 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTA AGGCTTCACC TAGTGAACCA TTGTGGGAGA CAATTCTCCT GTTTGTGCCT
AGAACTTTAG GAAAGTTAGT GCGCTCGCTT TTTGGTGTTG GAGAATACGA TGAGGCATAT
CGCAGGGACG GTTTGTGCTT CGTTATGCTT GTTCTTGCGA TTTTGTTCTG CGCATCAGAA
TGGTTTAGAG TTAGTGGATT TATTGGAGTA GGTCTCCATT TTGTGTCCTC TAGTTTGCTT
GGAATTATGA GCGTTGTTCT GCCTGTGTGG TTAAGCGTTG TTGCTTTTAG GTTGATGCGT
AACAGTGGAG CTGGCTCTGG TAATCCTCGT GTTATTAGCG GATTTATTAT TCTATTGTTG
TCTGTTTGCT CAATTCTTGA TATTTCTTCT GCACCTCGCG GAAAAGCGTT TAATTTAGAC
ACTGTACAGA AGTCAGGTGG GTTATTAGGT TTTGTGCTCG GGTCTCCGCT ATCGTGGGGT
CTTTCTCGTA TTTTTGCAAT TATTATTTTT GTAGTGGCTG CTATTTTTTC GATATTAATG
ATTACTCGCC TTCATGTAAC TGATATAGCT CAAGTCGTGG CTGCTATTCT TGCTAAGTAT
AATAATAAAA AGTCTTCTGA AGATTTAGGA AACTCTGCAG AAGATAATTC TGACAGCAAA
ACCAATTCTT TGGAATTTGC AGATGATGTG CCAACTCACA ATGAAGAGTT GCCGAAAAAT
AATAGCAGAT CTTCTCAAAT GTCTTCTGTG CTGAAACTGT TTAAATCATT CTTTAAGCGT
AAAAACAGTA ATAATAATGG GGAATTGCTT GACGAATACG CTGGCGATGA TGCATTTTCG
CATGCTGCTT CTCACGGTAA TAGTGCAGAT AATCTTGAAA GAGTTGAACC TCGTAAAGCA
AGAACTGTGA GCAGCTCTTC AGATAATAAT GCTGTAAATA ATTCTCAATT TGAAAATGCT
GATAATAATT CGAGTCAACT TACACCTAGA AGTGTTTCAT CTTCATCAAA GCCTGTTTCT
GAAGAAATAT TGCCAAAAGC TCCTATGAGT GATTCCTCTT TATCTGCAAG CGATCCATGG
TCAAGTATTC CAGCTGAACG TATGAATCAA TATCGCAGGG ATCAGGAAGA TTCAGATAAT
GAAAATGCTA CCGACAGTGA AAATGGTGCT GGCAATAATA ATGAGCCTTC TTTTGATTCT
TCCTCTGAAC CTTACAAGCT CCCTGATTTG AATCTTTTGG CTTATGGCAA GCCTCATGTT
GCGAGAACTC AAGCAAACGA TAACGTTATT CGTGCGCTAA CTTCTACTTT TGAGCAATTT
GACGTCGACG CTCACGTTAT TGGATTCCTT AGAGGGCCAT CTGTTACGCA GTACGAGGTT
GAGCTTGGTC CTGGTGTAAA AGTTGAAAAA GTTACGAATT TGCAAAAAAA TATTGCATAC
GCTGTAGCTA GCACGGATGT GCGTATTTTG TCGCCAATCC CAGGAAAGTC TGCTATTGGT
ATTGAAATTC CAAACGTCGA CCGCGAAATT GTGCATTTGG GAGATGTTCT GCGCTCGCAA
AAAGCTATGA ATGACCCTAA TCCTATGCTT ACAGGCGTTG GAAAAGATGT TGAAGGTCAT
TTCGTAACTG CAGCTCTCGA TAAAATGCCG CATTTGCTTG TTGCTGGTGC TACTGGTTCT
GGTAAGTCGA GTTTCATTAA CTCAATGCTT ACTTCGATTA TTATGAGGGC AACTCCTGAA
CAAGTTCGCA TGATTATGGT CGATCCTAAG CGCGTGGAGC TTTCTGCTTA TGCTGGCATT
CCGCATTTGC TTACTCCGAT TATTACGGAT CCTAAGAAGG CTGCGCAGGC TCTTGAGTGG
GTTGTTAAAG AGATGGATGC TCGCTACGAC GACTTGCAAT TCTTTGGTTT CCGTCATGTT
AAAGATTTCA ACAAGGCTGT TCGTGAAGGA AAGGTTCATG CTCCGGCTGG ATCTGAGCGA
AAAGTTGCTC CATACCCGTA TTTACTTGTG GTGGTAGATG AGATGGCTGA TTTGATGATG
GTTGCTAAGA ACGATGTGGA AAGTTCTATT CAGCGTATTA CTCAGCTTGC TCGAGCTGCA
GGTGTGCATT TGGTTCTCGC TACTCAGCGT CCGTCTGTTG ATGTTGTAAC AGGTTTAATT
AAGGCGAATA TTCCTTCTCG TTTGGCTTTT GCTACTTCGT CTGCCACTGA TTCAAGGGTT
ATTCTCGATA CTGTTGGCGC AGAAACCTTG ATTGGTCAAG GCGACGCTTT GTTCCTTCCA
ATGGGTGCTG CTAAGCCTCA GCGTGTGCAG GGTTCGTGGG TGAGTGAATC TGAAATTCGT
AAGGCTGTTG AGTATGTTCG CACGCAGCGC AAGCCAAAGT ATCGTGAAGA TATTGAGCAA
ATGGCTCAAA AAGCTGATGC TCAAGCTCAA AGCAAGCTTA AAACTAGCGA TATTGGCGAC
GATATGGATG AGTTGCTTCA GGCTGCTGAG CTTGTTGTTA GCTCGCAATT TGGCTCTACT
TCAATGCTTC AGCGCAAGTT GCGCGTTGGC TTTGCAAAGG CAGGTCGATT GATGGATTTG
CTTGAATCTC GAGGAGTAGT GGGACCTTCT GAAGGTTCTA AAGCTCGCGA AGTTTTGGTT
CAGCCGGAAG ATTTGCCAAA AGTTTTGGCT TTTATTCGTG GTGAGTCAGA TTCGTTATAA
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| Protein sequence | MAGKASPSEP LWETILLFVP RTLGKLVRSL FGVGEYDEAY RRDGLCFVML VLAILFCASE
WFRVSGFIGV GLHFVSSSLL GIMSVVLPVW LSVVAFRLMR NSGAGSGNPR VISGFIILLL
SVCSILDISS APRGKAFNLD TVQKSGGLLG FVLGSPLSWG LSRIFAIIIF VVAAIFSILM
ITRLHVTDIA QVVAAILAKY NNKKSSEDLG NSAEDNSDSK TNSLEFADDV PTHNEELPKN
NSRSSQMSSV LKLFKSFFKR KNSNNNGELL DEYAGDDAFS HAASHGNSAD NLERVEPRKA
RTVSSSSDNN AVNNSQFENA DNNSSQLTPR SVSSSSKPVS EEILPKAPMS DSSLSASDPW
SSIPAERMNQ YRRDQEDSDN ENATDSENGA GNNNEPSFDS SSEPYKLPDL NLLAYGKPHV
ARTQANDNVI RALTSTFEQF DVDAHVIGFL RGPSVTQYEV ELGPGVKVEK VTNLQKNIAY
AVASTDVRIL SPIPGKSAIG IEIPNVDREI VHLGDVLRSQ KAMNDPNPML TGVGKDVEGH
FVTAALDKMP HLLVAGATGS GKSSFINSML TSIIMRATPE QVRMIMVDPK RVELSAYAGI
PHLLTPIITD PKKAAQALEW VVKEMDARYD DLQFFGFRHV KDFNKAVREG KVHAPAGSER
KVAPYPYLLV VVDEMADLMM VAKNDVESSI QRITQLARAA GVHLVLATQR PSVDVVTGLI
KANIPSRLAF ATSSATDSRV ILDTVGAETL IGQGDALFLP MGAAKPQRVQ GSWVSESEIR
KAVEYVRTQR KPKYREDIEQ MAQKADAQAQ SKLKTSDIGD DMDELLQAAE LVVSSQFGST
SMLQRKLRVG FAKAGRLMDL LESRGVVGPS EGSKAREVLV QPEDLPKVLA FIRGESDSL
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