| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1023 |
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| Symbol | pgsA |
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| ID | 8710012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1153389 |
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| End bp | 1154069 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646483116 |
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| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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| Protein accession | YP_003374229 |
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| Protein GI | 283783475 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA AAGCTAAGTC ATCATTTTTT GCTGGCTGGA ATTATGCTCC GAATATTGTG
ACTTATATCC GTATTTTGCT TTCGCTTGTT TTTATTGTTT TATATTTGAA AGCAGGTATA
TGGGGTTTTG ATTCAGTTTC GTTGCGTTGG GCTGCGTTTG TGCTGTTTGT TGTAGCTGCT
TCTACGGATA AGCTTGACGG GTGGATGGCT CGTAAATATC ATAAGGTTAC AGAATTAGGT
AAGTTGCTTG ATCCAATTGC GGATAAAATT CTTATTTTAG CTGCGCTTAT TATTGCTTCT
GTTTTCGGCG AAATTTATTG GTGGATAACC ATCTTGTTCA TGATTCGCGA AATTGCCATT
ACTCTTGTGC GAATTTATGT TGTTCATGTT CGTGGAAGGG TAATTGCTGC ATCCTCTGCA
GGAAAATATA AGACTCTTAC GCAGTCGATT GGTATTGCAA TGATTATTGC ACCTCTTGTT
GCAACTCTTC ATGCTAATCC ATTGCCTTCT TGGATGGTTT CTTACTATGC AGTTGCTTTT
GGCTTGCTTG GTATTTCTTT GGGCTTTGCT TTCTATTCTG CAGTTTTGTA TGTCTATAGT
GCTTTCTTTG AGGGTTCTTC AAATAGCGAA TCTCAAGTTG ATGATGCAAA AAATGCAGTG
CCTTTGTCTC CTGTGAAGTA A
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| Protein sequence | MKKKAKSSFF AGWNYAPNIV TYIRILLSLV FIVLYLKAGI WGFDSVSLRW AAFVLFVVAA
STDKLDGWMA RKYHKVTELG KLLDPIADKI LILAALIIAS VFGEIYWWIT ILFMIREIAI
TLVRIYVVHV RGRVIAASSA GKYKTLTQSI GIAMIIAPLV ATLHANPLPS WMVSYYAVAF
GLLGISLGFA FYSAVLYVYS AFFEGSSNSE SQVDDAKNAV PLSPVK
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