| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1021 |
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| Symbol | recA |
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| ID | 8709142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1151243 |
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| End bp | 1152382 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646483114 |
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| Product | RecA protein |
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| Protein accession | YP_003374227 |
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| Protein GI | 283783473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA CAAAAAGTAA AGGCAGTATT AATCGCCTTA TTGATGCGGA TAAAACAGAT
CCACGTCGCC AAGCAGCGTT AGAAACTGCT TTAGCCAATG TTGAACGACA ATATGGAAAA
GGTTCTGCAA TGCGCTTAGG TGATAGACCT ATGCAAGATG TAGAAGTTAT TCCTACTGGT
TCATTAGCGT TGGACACTGC TTTGGGGATT GGCGGTGTTC CTAGAGGGCG AATAGTTGAA
GTCTACGGTC CTGAGTCTTC TGGTAAAACA ACTCTTGCTT TGCATATTGT TGCAAATGCT
CAAAAAAATG GTGGGGTAGC GGCATTTATT GATGCTGAGC ATGCGTTGGA TCCTGTCTAT
GCGAGAAAGC TTGGAGTAGA CACGGATGCT CTTATTGTTT CTCAGCCAGA TAATGGTGAG
CAGGCATTGG AAATTGCTGA TATGCTTATT CGTTCTGGTG CGTTAGATGT TATTGTTGTT
GATTCTGTAG CGGCATTAGT TCCTAAAGCT GAAATCGATG GCGATATGGG AGATAGCCAT
GTGGGCTTAC AAGCTCGCTT AATGAGTCAG GCGTTGCGTA AGATGACTGG TGCTCTTTCA
CAAGCTGGCA CTACTGCTAT TTTTATTAAT CAGCTTCGTG AAAAAATTGG CGTATTCTTT
GGTAACCCTG AAACTACCAC TGGTGGTAAA GCTTTGAAGT TCTATGCGTC TGTGCGCATG
GATATTCGCA GAGTTTCTAC TATTAAAGAG GGCGAAGAAG CTGTTGGTAA CCGAACTAAA
GTTAAGATTG TCAAGAATAA AATGGCTCCG CCTTTCAAAA CTGCTGAGTT TGATGTTCTT
TACGGAGAAG GCATCTCGAC TGAAGGTTCT GTTATCGATA TGGGACTGCA AGCTGAAGTT
ATTAAGAAAT CTGGTTCTTG GTTTACTTAT GACGGTGAGC AGCTTGGACA AGGTCGTGAA
AACGTCCGTA AGTTCTTGAA AGATAATCCA GCTATTACTG AAGAAATTAG CGAAAAAGTC
AAAGCTTTGT TAGGTTTAAT GCATACTGAA GATCAATTCG CTGAAGATTC TGAACTAGAT
CAATTCGATG ATGATTCTGT AGCTAAAAAT TCTGCACAAA AGTCATCCGA ATCGAAGTAA
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| Protein sequence | MAQTKSKGSI NRLIDADKTD PRRQAALETA LANVERQYGK GSAMRLGDRP MQDVEVIPTG
SLALDTALGI GGVPRGRIVE VYGPESSGKT TLALHIVANA QKNGGVAAFI DAEHALDPVY
ARKLGVDTDA LIVSQPDNGE QALEIADMLI RSGALDVIVV DSVAALVPKA EIDGDMGDSH
VGLQARLMSQ ALRKMTGALS QAGTTAIFIN QLREKIGVFF GNPETTTGGK ALKFYASVRM
DIRRVSTIKE GEEAVGNRTK VKIVKNKMAP PFKTAEFDVL YGEGISTEGS VIDMGLQAEV
IKKSGSWFTY DGEQLGQGRE NVRKFLKDNP AITEEISEKV KALLGLMHTE DQFAEDSELD
QFDDDSVAKN SAQKSSESK
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