| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1012 |
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| Symbol | |
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| ID | 8709928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1142857 |
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| End bp | 1143279 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646483105 |
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| Product | iojap-like protein |
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| Protein accession | YP_003374219 |
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| Protein GI | 283783465 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
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| TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCTT TAGAAAGCTC AATTAGTGCA ATTCGTATTG CTGCCGCTGC TGCAGACCGT
TTGAAAGCAA CGAACGAGCA GGCTTTTGAT GTAAGCGATT TGCTTGGTAT TACGGATGCT
ATGTTAGTTG TTTCTGCTTC AAACGAGCGT CAAGTATTGG GTGTTGCAGA AGAAATCGAA
AAAGACTTGT ACTTGAAAGA CAACAAACGC AAGGCTTTAT CTCGTGAAGG CTTGGAATTA
GCACAGTGGA TTTTGCTTGA TTTTGGCGAT TTTGTAGTTC ATGTAATGCA TGAGGAAGCA
CGAGCATTCT ACCGCTTGGA ACGCCTGTGG AATGATTGCC CGGCAATCGA TTTGCAGCTG
CCAGAGCATG CTAGCGAAAC TGAAGATTCT AGCAAAACTG AAGATTCTAG CGAAACTGAA
TAA
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| Protein sequence | MTALESSISA IRIAAAAADR LKATNEQAFD VSDLLGITDA MLVVSASNER QVLGVAEEIE
KDLYLKDNKR KALSREGLEL AQWILLDFGD FVVHVMHEEA RAFYRLERLW NDCPAIDLQL
PEHASETEDS SKTEDSSETE
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