Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0958 |
Symbol | |
ID | 8708856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1100563 |
End bp | 1100805 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646483053 |
Product | DNA-binding protein |
Protein accession | YP_003374168 |
Protein GI | 283783414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCGA AAGCAATTAC AGATGAGCGC TTAAAAAAGG GCATGACCCT TAAAGAGCTT TCTAAAAAAG CAGGCATACC CCCTACAACG CTTGATAGAG TAGTCCACGG TAGGCGTGAT ATAAACGTTT CTCAGCTATA CCAAATCGCG ACTGCGTTAG GAACAACAAT CAACGATATT GCCGACAAAG CCGAGCTTTA CCTAACAGAA GACGCGTTGG AGAATATTGA TGAGAAAAAT TAA
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Protein sequence | MIAKAITDER LKKGMTLKEL SKKAGIPPTT LDRVVHGRRD INVSQLYQIA TALGTTINDI ADKAELYLTE DALENIDEKN
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