| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0944 |
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| Symbol | leuS |
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| ID | 8708958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1084873 |
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| End bp | 1087857 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646483041 |
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| Product | leucine--tRNA ligase |
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| Protein accession | YP_003374157 |
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| Protein GI | 283783403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA ACGATCAACA GTATGCAACA GCTGACAACA AAGCTACTAT TGCTGAGCCA
GCTTTTCGTT ACAACGCGCA GCTCGCACAA GATATTGAGC AGCGCTGGCA AAAAACCTGG
GATGAACAAG GTACGTTCTG GGCTGCTAAT GTTAAAGGCG ATTTGAAGGA TGGTGAAGGC
AAGCTTGCTG ACGGTCGTCC TTCTTTCTTT GCAATGGACA TGTTCCCGTA TCCTTCCGGC
AAAGGCTTAC ACGTTGGACA TCCTCTTGGA TATTTGGCAA CGGATGTTGT AAGCCGCTAC
CATCGCATGA AGGGTGAGAA TGTTCTTCAT GCAATGGGTT ACGACGCTTT TGGTTTGCCG
GCGGAACAGT ACGCTGTTCA AACTGGTCAG CATCCGCGCA TCACCACTGA GGCAAATATT
GCTAATATGC GCAGGCAGTT GCATCGTATG GGCTTGAGTT TTGACGATCG TAGGTCTTTT
GCAACGATTG ACACAAATTA TGTGCGTTGG ACGCAATGGA TTTTCTCGAA GCTTTATGAC
GCTTGGTATG ACACTGATTT TGTGCGCAAA GACGGCGGAA AGGGTTCTGC TCGTCCGATT
GCTGAACTCG TTGATGAGTT TAAGAGCGGC AAGCGCGAAA TTCCTGGTTT TGCAGGCAAA
AAGTGGGAAG AGCTTAATAA AGTAGAGCAA GCGGATGTAT TAAACAATTT CCGCATTGCT
TATATTTCTA AATCTCCTGT AAATTGGTGC CCAGGCTTGG GAACTGTGCT TGCAAACGAG
GAAGTTACTG CAGAAGGTAA GTCTGAACGC GGAAACTTCC CAGTATTCCA GCGCAACCTT
CGCCAGTGGT CCATGCGAAT TACCGCTTAT GGACACCGCT TGGTGGAAGA TTTGAACACT
ATTGATTGGT CAGAAAAAGT TAAGCTTATG CAGCGAAACT GGATCGGCGA ATCTCACGGT
GCATCTGTGC ACTTTGAAGT GCCATGTGCG GACGGCGAAA CGCGCGATTT GGAAGTGTAC
ACTACTCGTC CAGACACGCT TTTTGGTACA ACGTTTGCGG TTGTTTCCGT AGATCACCCA
ATTCTTGAGC ATGTTCCAGA AGCTTGGGGT GCGGACGTTC CAGAAAGCTG GAAGGGCGGT
TACGCAAGTC TTAAAGAAGG CTTGGCAGAG TATCAAGCTC AAGCTCGCGC GAAGACTGCT
AAAGATCGCA CGGAAGATGC AGGAGCAAAA ACCGGCTTGT TTACTGGTCT TTACGCAATT
AATCCTGTAA ATGGAGCAAA ACTTCCGCTG TTTGCTGCTG ACTACGTGCT TATGGGTTAC
GGTACAGGCG CAATTATGGC GGTTCCTGGC GGCGACCAGC GCGATTATGA TTTCGCAAAA
GCATTCGGTT TGCCAGTAAT TTACACTGTT GAGCCTTTGC CTGATTCCGA AGAAAAGTTG
GCAGATTACG AAGGTAAAGC TCCGTTTGTT TCTCACGACG GAATTGTTAT TAATTCAGCA
GTAGAACATA CGCACAAGCT TGGTGACGCT TTGTCTATTA ACGGTTTGCG CGTAGACGAA
GCTATTAAAA AGGTGACTAC TTGGCTTGAA GCTGCAGGCG TAGGAAAAGG TAGGGTTTCT
TACCGACTTC GCGACTGGCT GTTCTCTCGC CAGCGCTACT GGGGTGAGCC ATTCCCAATC
GTTTATGACG AAGATGGTGT TGCTCACTTA GTGCCAGATA GCGAGCTTCC AATTGCATTG
CCGGACGTTC CTGACTATCA GCCAAAAACT TACGCTCCAG ACGATGCAAA TTCGGAGCCT
GAAGCACCTT TGAGCCGAAA CGAAGATTGG GTAAAAGTTC AGCTCGACCT TGGCGATGGC
GTAAAAACCT ACTATCGTGA CACCAACACT ATGCCGAACT GGGCTGGTTC TTGCTGGTAT
TACATGCGCT ACTTGGATCC AAACGATGCT GAGCATATGG TTGACAGCGA TGAATACGAC
TACTGGATGG GCACAAACCG TCCAGGAAAA GAGCACGTAT CTGGAGGCGT TGACCTTTAC
GTTGGTGGTG TAGAGCATGC AGTTTTGCAC TTGCTTTACT CGCGCTTCTG GCATAAGGCG
CTTTACGACT TGGGTTACGT GGATTCTGCT GAACCATTCC ACCGCTTGTT TAACCAGGGT
ATGATTCAAG CTTACGCTTA CACGGATGAG CGCGGACAGT ACGTTCCTGC TGACGAGGTT
GAAGAAGGTG CTTCAAACAG CGCTGGTGAG CCAACCTTTA CATGGCATGG CGAGAGCGTG
AACCGCGAGT TCGGCAAAAT GGGCAAGAGC TTAAAGAATA TTGTGACTCC AGATTACATG
TACGAAAACT ACGGTGCAGA TACGTTCCGC TTGTACGAAA TGAGCATGGG TCCGCTTTCT
GAGTCTCGTC CATGGAACAC GCGTAACGTT GTTGGTGGCA TGCGATTCTT GCAGCGCTTG
TGGCGTAACG TTGTGAACGA AGAAACCGGA GCTTGCGTGG TAACTGACGA CGCTTTGGAT
GAGAAGACGT TGAAGATTCT TAACAACACA ATTGCAGAAG TGACTGTGGA AATGGAAGCA
ATGCGTCCAA ATACTGCAAT TGCTAAGCTG ATTGTGCTTA ACAACCACTT GACTTCGCTT
CCTCACGTGC CGCGAGCAGC TGTCGAGCCG CTGGTTCTTA TGCTGGCTCC AATCGCGCCG
CATATTTGCG AAGAAATGTG GAGCAAGCTT GGACACGCAA AGTCGATTGC TCACGCAGAT
TGGCCTGTTG CGGATTCTCG CTACGTTGGT GAGGATACTG TTACTGCCGT TGTGCAAATA
AAGGGCAAGG TTCGAGCAAA GCTTGAAGTT GATCCAAATA TTGACGCTTC TGAACTTGAA
AAGCTTGCGC TAGAAGCTGT AGCTGATCGC TTGGGCGGTA AGGCTCCGCG CAAGGTGATT
GTGAAGGCTC CGAAGATTGT GTCTATTGTG CCGGACGAAA GCTGA
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| Protein sequence | MNDNDQQYAT ADNKATIAEP AFRYNAQLAQ DIEQRWQKTW DEQGTFWAAN VKGDLKDGEG
KLADGRPSFF AMDMFPYPSG KGLHVGHPLG YLATDVVSRY HRMKGENVLH AMGYDAFGLP
AEQYAVQTGQ HPRITTEANI ANMRRQLHRM GLSFDDRRSF ATIDTNYVRW TQWIFSKLYD
AWYDTDFVRK DGGKGSARPI AELVDEFKSG KREIPGFAGK KWEELNKVEQ ADVLNNFRIA
YISKSPVNWC PGLGTVLANE EVTAEGKSER GNFPVFQRNL RQWSMRITAY GHRLVEDLNT
IDWSEKVKLM QRNWIGESHG ASVHFEVPCA DGETRDLEVY TTRPDTLFGT TFAVVSVDHP
ILEHVPEAWG ADVPESWKGG YASLKEGLAE YQAQARAKTA KDRTEDAGAK TGLFTGLYAI
NPVNGAKLPL FAADYVLMGY GTGAIMAVPG GDQRDYDFAK AFGLPVIYTV EPLPDSEEKL
ADYEGKAPFV SHDGIVINSA VEHTHKLGDA LSINGLRVDE AIKKVTTWLE AAGVGKGRVS
YRLRDWLFSR QRYWGEPFPI VYDEDGVAHL VPDSELPIAL PDVPDYQPKT YAPDDANSEP
EAPLSRNEDW VKVQLDLGDG VKTYYRDTNT MPNWAGSCWY YMRYLDPNDA EHMVDSDEYD
YWMGTNRPGK EHVSGGVDLY VGGVEHAVLH LLYSRFWHKA LYDLGYVDSA EPFHRLFNQG
MIQAYAYTDE RGQYVPADEV EEGASNSAGE PTFTWHGESV NREFGKMGKS LKNIVTPDYM
YENYGADTFR LYEMSMGPLS ESRPWNTRNV VGGMRFLQRL WRNVVNEETG ACVVTDDALD
EKTLKILNNT IAEVTVEMEA MRPNTAIAKL IVLNNHLTSL PHVPRAAVEP LVLMLAPIAP
HICEEMWSKL GHAKSIAHAD WPVADSRYVG EDTVTAVVQI KGKVRAKLEV DPNIDASELE
KLALEAVADR LGGKAPRKVI VKAPKIVSIV PDES
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