| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0933 |
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| Symbol | metF |
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| ID | 8709936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1072121 |
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| End bp | 1072975 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483030 |
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| Product | methylenetetrahydrofolate reductase (NAD(P)H) |
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| Protein accession | YP_003374146 |
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| Protein GI | 283783392 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATATA AACCAAAGTT TTCGCTGGAA GTTTTCCCAC CTAAGCGCAC ATCTCCTATC
GGTACGATTT ATGATACTTT GGATGGGTTG AAAGGCCTTG ACCCGGATTT TATTTCGGTT
ACTTACGGCA CTGGAAAGCT GCAGGATCGT ACTGCTACTG CGCGTATTGC TCATACGATT
CGCTCCGAAT ACGGTATTAA TGCGGTTGCT CATTTGACTG CTCGATACCT TGATTATGAT
GCTGTTGATG AAGCTTTGGA AATGTTTGAT AATGCTGGTG TTTCCGGTGT TTTGGCTTTG
CGCGGCGATG TGATTGCTGG CCAGGAATCG GCAGGCGTTT TTGAGCACGC TAGTGACTTG
GTTTATTATA TTCGTTCAAA GCACCCGGAT TTGCCGATTT TGGGTGCTTG CTACCCGGAG
AAGCATCCGG AAGCGGAAAG TTTGCAAGCG GATATTGATA ATTTGAAGCG CAAGGTTGAT
GCGGGTGTTA CGCATTTAAT TTCGCAACTT TTTTACGATA ACGAGGATTT TTTGCGTTTC
CGTGATTTAG CTCGTGCCGC TGGTATTAAT GTGCCAATTG AAGCTGGCGT GATGCCTGTT
GCGAACGCTT CGCAAGTTAA GCGCATGACG AGTTTGTGTG CGTCTCGCAT TACTTCGCAA
GTTTCCGCAA TGATGGATCG TTGGGGGAGT AATGCTGATT GCTTGCGCGA TGCTGGCAGT
ATTTTTGCTT CTCAGCAGAT TAACGATTTA ATTGCTGAAG GTGTGGATGG CATTCACTTG
TATACCATGA ATCACCCGGG CATTGCGCGC AGGATTTGGG CGAATGTGAA GCCGCTGTTT
ACGAAAATTG GGTAG
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| Protein sequence | MPYKPKFSLE VFPPKRTSPI GTIYDTLDGL KGLDPDFISV TYGTGKLQDR TATARIAHTI
RSEYGINAVA HLTARYLDYD AVDEALEMFD NAGVSGVLAL RGDVIAGQES AGVFEHASDL
VYYIRSKHPD LPILGACYPE KHPEAESLQA DIDNLKRKVD AGVTHLISQL FYDNEDFLRF
RDLARAAGIN VPIEAGVMPV ANASQVKRMT SLCASRITSQ VSAMMDRWGS NADCLRDAGS
IFASQQINDL IAEGVDGIHL YTMNHPGIAR RIWANVKPLF TKIG
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