| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0927 |
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| Symbol | pyrB |
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| ID | 8709869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1058850 |
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| End bp | 1060085 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483025 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_003374141 |
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| Protein GI | 283783387 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG CAATTTCTAG TTCTTTACAT CAAACTTTTT CTCGCAGCAC AATTGCAAAT
TCTCTAGCTG GCAAAAGTGT TGTTACATTA GACGATATTT CAACTGCGCA AATACGAATG
CTTTTAGACA AAGCGCGATA CATTGATTCG CACCGTAAAG AAGTGGCTCA CACTTGCGAT
GGCAGAGTGT TGGCCACTCT TTTTTATGAG CCGAGCACGC GCACTCGCTT AAGCTTCGAA
ACAGCAATGC TGCGTTTAGG CGGAAAAGTA ATCGGTTTTG CAGGTGCGCA ACTTTCCAGC
GCGAGCAAAG GTGAGACTGT AAACGATACT TTGAAAGTCG TGTCTAACTA TGTCGATGTT
GTTGCAATGC GTCACCCAAA GGAGGGTGCT GCTTTTGTTG CAACGCAAGC TGTGAGCACG
CCTATTATTA ACGCTGGCGA CGGCGGTCAC ATGCACCCAA CTCAAACTCT TGCAGACTTG
GCAACGATTC TTGCGCGTTT CGGCCGCCTT AATAATCTCA CTGTCGGCTT GTGCGGCGAC
TTAACATATG GTCGCACGGT TCACTCGCTT ATTGAAACTT TGTGCCGCTT TGGAAACGTT
CATTTTGTGC TGATTAGCCC GGATGAGCTT AAAACTCCGC AGTACGTAAT CGACCGTATT
ATTGACACTC CTTCGTGCAC TTATGAAGAA ACTCGCGACT TGATGGAAGT TATTGGCAAG
CTTGACGTGC TTTACATGAC TCGCGTGCAA GAAGAACGTT TTACGGATCG CGAGCAATAC
TTGCGACTTC GTGACACGTA CATTTTGACT GAAGAAAAAT TGCAAAAAGC AAAGTCGCAT
ATGCCTGTGC TGCATCCGCT TCCTCGAATT AACGAGATTG CTGTTGATGT TGACGACGAT
CCGCGCGCAG CATACTTTGA GCAGGTTAAA AACGGTATGC TTATGCGTAT GGCTTTGGAA
AGTTCCGTTC TTGGCGACGA GCTTTGCGGC TACGGGCCAA CTGATTTTGT GAACGTTCCA
GAAGACGAAT TGCAAGCGGT TGATGCACAC GGAATTTCAT TAACGGATCC TCGCGTTCAC
ACAACCGACG AGAATGCGCC TGAAACTCTT ACATGCCCGA ATCCTCGTTG CATAACAAAC
AGCGAACTAA CTCTTAAACG CAAGTTCTAC AAAGCTGATT CCGTAAGGCA CGAGTATCGC
TGCATGTATT GCGACGAAGA AGCAGAAACT AAGTAA
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| Protein sequence | MTNAISSSLH QTFSRSTIAN SLAGKSVVTL DDISTAQIRM LLDKARYIDS HRKEVAHTCD
GRVLATLFYE PSTRTRLSFE TAMLRLGGKV IGFAGAQLSS ASKGETVNDT LKVVSNYVDV
VAMRHPKEGA AFVATQAVST PIINAGDGGH MHPTQTLADL ATILARFGRL NNLTVGLCGD
LTYGRTVHSL IETLCRFGNV HFVLISPDEL KTPQYVIDRI IDTPSCTYEE TRDLMEVIGK
LDVLYMTRVQ EERFTDREQY LRLRDTYILT EEKLQKAKSH MPVLHPLPRI NEIAVDVDDD
PRAAYFEQVK NGMLMRMALE SSVLGDELCG YGPTDFVNVP EDELQAVDAH GISLTDPRVH
TTDENAPETL TCPNPRCITN SELTLKRKFY KADSVRHEYR CMYCDEEAET K
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