| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0921 |
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| Symbol | pyrE |
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| ID | 8709047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1053517 |
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| End bp | 1054209 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646483020 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_003374136 |
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| Protein GI | 283783382 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAT TAGACGAACG TTTTACAAAG TTTTTGCTTG ATTCAGGCGC GCTTAAATTT
GGTGACTTTA CACTGAAATC TGGTCGTCAA TCACCTTATT TTATTAACGC TGGCGCTTTT
GACGACGGCA TGAAAATCGC GAGCTTAGGC GCGTACTATG CTCAGCGCGT TGTTGCAGCA
ATCGAAGACG GCAAACTTCC GCAAGATATC GACACTGTTT TCGGTCCTGC TTATAAGGGC
ATTCCGCTGG CAGTTTCTAC GGCAATGGCT TTGACGAATA ATCACAATAT GCCTGTTGGT
TTTACTTTCG ACCGCAAAGA ACGAAAGGAC CACGGCGACG GCGGAATTAT GGTTGGAAAA
CCGTTAAAAG ACGGCATGAA AGTTCTGTTA GTTGACGACG TGATGACTGC TGGAACTGCA
GTTCGCGAAA CTTTGCCAAA GCTTAAAGCG GAAGCAAATG TGCAAGTTGT TGGCTTGATT
TTGGCAGTAG ACAGAATGGA ACGCACGAAA GACAGTGAGC TTTCTGCAGT AAAAGCAGTA
GAGCAGGAGT TTGGATTCCC AGTTTTGCCA ATTGCAAATG TGCGCGAAAT TTTCGCTGCA
GCTCAAAAAC TCACTAATAG TGACGGTAAG CCAGTTATGG ATGAGGAATT AGCTTCGCGC
GCTGCAGATT ACTTGCGTAC GTATGGTGCG TAA
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| Protein sequence | MAELDERFTK FLLDSGALKF GDFTLKSGRQ SPYFINAGAF DDGMKIASLG AYYAQRVVAA
IEDGKLPQDI DTVFGPAYKG IPLAVSTAMA LTNNHNMPVG FTFDRKERKD HGDGGIMVGK
PLKDGMKVLL VDDVMTAGTA VRETLPKLKA EANVQVVGLI LAVDRMERTK DSELSAVKAV
EQEFGFPVLP IANVREIFAA AQKLTNSDGK PVMDEELASR AADYLRTYGA
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