Gene HMPREF0424_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0915 
Symbolgmk 
ID8709613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp1045544 
End bp1046152 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID646483013 
Productguanylate kinase 
Protein accessionYP_003374129 
Protein GI283783375 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCCA CGGATGAGAC TGCAGTTTCG CAGTCTAGAC GTCGATTAAT CGTATTAACG 
GGTCCTACTG CGGCTGGTAA AGGCACAGTA GAAGGCATAC TTCGTGAGAA GCATCCACAT 
ATTTGGCTAT CTGTTTCTGC TACCACTCGT GCGCCTAGAC CTGGTGAATT TAATGGTATT 
CACTATTGGT TCTTAGATGA AGAAGAATTT GAGCGTCGTA AGCGTAATGG CGAATTCTTG 
GAAACTGCGC TGGTTCATGG CATGGCTCAT TATGGCACCC TTCTTCAGCC TGTTTTGGAT 
CATCTTACGC AAGATATTCC TACTTTGTTG GAAATAGATT TGCAAGGAGC TAGGCGTGTA 
AAACAAGAGG CAGCTCGTCT TGGATTAGAA GTCGTGTACG TGTTCATTGC GCCTCCGAGC 
TTTGAAGAGC TTAAGCGTCG TCTTATTGGT CGTGGTACTG AAACTCCTGA GCAGCAAGCA 
AAACGTTTGG AAACCGCTAA AGTTGAGATT GCTGCAGCTA AAGAGTTTGA TGTTGTTATT 
GTGAACGATA ATGCTGAGCG TGCCGCAGAT GAACTGTGGA ATGTTATTGC AAGCGAATAC 
GACTTATAG
 
Protein sequence
MGATDETAVS QSRRRLIVLT GPTAAGKGTV EGILREKHPH IWLSVSATTR APRPGEFNGI 
HYWFLDEEEF ERRKRNGEFL ETALVHGMAH YGTLLQPVLD HLTQDIPTLL EIDLQGARRV 
KQEAARLGLE VVYVFIAPPS FEELKRRLIG RGTETPEQQA KRLETAKVEI AAAKEFDVVI 
VNDNAERAAD ELWNVIASEY DL