| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0909 |
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| Symbol | |
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| ID | 8709973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1037935 |
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| End bp | 1038882 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646483007 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374123 |
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| Protein GI | 283783369 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1481] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00647] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTCTTC TTGACGACGT CAAAAATGAA CTCGTTTCAA ACAACAATGA GCTCCCGACT
GTCATTATGG CTCAAGCTGC AGCAATGATG CGCTTTGCTG GCGGCTTAAG GCCAGTAAAT
AATCAAGCTG TTATTCGCGC TCAGTTGGAT TCTCAGCGCG CAGCTCAGTG GCTTGTTGAG
GTATTGAAAA CTTATTTCCA GAGGGAAGCA ACAATTGCTC AAGTTTCTCG GCAAACTCCT
ACGGGCACTG TAGTTCGCTA TGACGTGGTA GTTGAGCGTG GTGCTGCAGC ACTGGCTTTG
CAATCTGGTC TTCTTGATCG ACGTATGAGA ATTGTTGCAG GTCTTGCACC TGAGATTGTT
GGTGGAAGTA TCGCCCAAAT CAAAGCAGCT TGGCGTGGTG CTTTCTTGGC TCACGGTGCT
ATTTCCGACC CTGGCAAAGC TAGCTATTTG GAAGTTGTTT GCCCAACTCA TGAGGCTGCA
AATGCTTTGC AAACTATGGC GGCGCGACTT GGCATTAGCG CCAAGGCTCG TCAGGTTCGT
AGCTCTGAGC GAGTGACGTT GCGCGATTCT GACGCAATTG AGCGAATGTT GATTTTGATT
GGTGCTCCTC GTTCTGCTCG CGAATGGACC GGTAAGCGTT CGGACGGTGA AGCTCGCGGA
AAAGCAAACC GTTTGGCTAA TTTTGACGAT GCGAATATGC GTCGTAGTGC TAAGGCTGCT
GCTGAGGCAT GCGAAAAGGT TCGTCACGCA TTCGATATTT TGGGCGACGA TATTCCAGAT
AATTTGTTGA TGGCTGGAAA GCTTCGTCTT GAGCATAGCG ACGCAAGTTT GGAAGAGCTT
GGTCACTTGG CTGATCCTCC TATTACAAAG GATGCGATTG CAGGGCGAAT TCGTAGACTT
TTGCAGCTTT CAGCGAAGGT TGAGAAGTCG CGTATGCAGC AGCTTTAA
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| Protein sequence | MALLDDVKNE LVSNNNELPT VIMAQAAAMM RFAGGLRPVN NQAVIRAQLD SQRAAQWLVE
VLKTYFQREA TIAQVSRQTP TGTVVRYDVV VERGAAALAL QSGLLDRRMR IVAGLAPEIV
GGSIAQIKAA WRGAFLAHGA ISDPGKASYL EVVCPTHEAA NALQTMAARL GISAKARQVR
SSERVTLRDS DAIERMLILI GAPRSAREWT GKRSDGEARG KANRLANFDD ANMRRSAKAA
AEACEKVRHA FDILGDDIPD NLLMAGKLRL EHSDASLEEL GHLADPPITK DAIAGRIRRL
LQLSAKVEKS RMQQL
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