| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0900 |
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| Symbol | |
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| ID | 8709588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1025405 |
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| End bp | 1026556 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482998 |
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| Product | putative chaperone protein DnaJ |
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| Protein accession | YP_003374114 |
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| Protein GI | 283783360 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTGATT ACTACAAAGT TCTAGGCGTT GATCACAATG CTAGCGACGA CGAAATTCGC
AAAGCCTATC GCAAGATGAG CCGCAAATAT CATCCTGATA TTGCAGGCGC TGAGTTTGAA
GAAAAGTTTA AGGAAGTAAA TGCTGCCTAC GACGTGCTTT CTAATCCTGA AAAGCGTCGA
ATGGTAGACA TGGGTGTTGA TCCTAACGAT CCTTCTGCAG GAAGTGCCGG AGCTTCAGGT
GCTGGTTTTG CAGATATGGG CATGGGCGAC ATTTTCAGCC AGTTCTTTGG CGGTTCTTTC
GGTAATTCGC AAGGACCAAT TTCGCGTGTG CAGCCTGGCA ATGATGCGTT AGCTGAGGCT
CGTATTGATT TGAAAACCGC TATTTTTGGC GGAAATGTTA GCGTACGGTT AACTACTTTT
GGCGTTTGCA AGGATTGCTC TGGTTCCGGT TCTGCCGACA ATTCCGCTCC AGAACAGTGC
TCTGTGTGTC ACGGTTCTGG CTTCTGCCAA AAAGTTGTGC GCACTATGCT CGGTCAAATG
ATGTCTTCGA TGCCTTGTGA GCATTGCGAA GGTCATGGCA CGATTATTAA GAATATTTGC
CAAAACTGCC ACGGTCATGG TCGTGTGCGT TCAATTCGTG AAGTTGGAGT GAACGTGCCG
GCTGGAATTC GTGACGGTAG TCGTTTGCGC TTAGCTTCCC AAGGAAGCGT TGGTGAGTGC
GGCGGTCCTG CCGGCGATTT GTACGTTGAT ATTCATATTC GTGCAGATAA GCAATTTACT
CGTAACGAGG ATGATTTGCA TTGTTGGATT ACAGTTCCTA TGAGCTGGGC TGTTCTTGGT
CGTAGTCTTG AAATCGACAC TTTTGATGGT GCTCAGAAAA TAACGATTCC TGCAGGCTGC
CAAAATGAAG ACACTATTAC TTTGCCAAAT CTTGGTGTGA CGAAGCTTCG TTCTAAAGAT
CGCGGAAATA TCGTGGTTCA TGTGCTAGTG CAAACGCCTT CTAAGTTGAA TGATGAAGAG
CGTGCTTTGA TTGAAAAATT TGCTAAATTG CATGATAGTT CTATGAAGCA AGTGCAGCAG
CATTCGTTAA GTGAGCAGTC GAGTGAGCGT AAAGGTTTCT TTAGTAAATT AAAGGAAGCT
TTTGCTGGCT GA
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| Protein sequence | MTDYYKVLGV DHNASDDEIR KAYRKMSRKY HPDIAGAEFE EKFKEVNAAY DVLSNPEKRR
MVDMGVDPND PSAGSAGASG AGFADMGMGD IFSQFFGGSF GNSQGPISRV QPGNDALAEA
RIDLKTAIFG GNVSVRLTTF GVCKDCSGSG SADNSAPEQC SVCHGSGFCQ KVVRTMLGQM
MSSMPCEHCE GHGTIIKNIC QNCHGHGRVR SIREVGVNVP AGIRDGSRLR LASQGSVGEC
GGPAGDLYVD IHIRADKQFT RNEDDLHCWI TVPMSWAVLG RSLEIDTFDG AQKITIPAGC
QNEDTITLPN LGVTKLRSKD RGNIVVHVLV QTPSKLNDEE RALIEKFAKL HDSSMKQVQQ
HSLSEQSSER KGFFSKLKEA FAG
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