| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0893 |
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| Symbol | |
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| ID | 8709642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1015617 |
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| End bp | 1016153 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482992 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin-type |
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| Protein accession | YP_003374108 |
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| Protein GI | 283783354 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAG TTATTATGCA TACTTCTGAA GGCGATATAA AAATCAATTT GTTTGACAGT
AAAGCGCCTG AAACCGTCAA AAATTTTGTT GGCTTAGCTA CTGGTGAGCG CGAGTGGCTT
GACTCATTCA GTGGAAAACC TTCGCATGAG CCATTCTACG ATGGTTTAAC TTTCCACCGC
ATCATTAAGG ATTTCATGAT TCAGGGTGGC TGCCCACTCG GCAATGGAAC TGGCGGTCCT
GGATACGAGT TTGACGATGA AATTGACGCA TCCTTGAAGT TCGATAAGCC TTATTTGCTC
GCTATGGCAA ATGCTGGAAA GCGTCGCGGT CGTGACGGTC GTTTGCATGG CACTAACGGT
TCGCAGTTCT TCATTACAAC TGTGCCAACT CCATGGCTTG ATGGCCACCA TACAATTTTC
GGCGAAGTTG CTGACGATGA ATCGAAGGCG GTTGTCGATA AGCTCGAGGC TGTCGCAACG
GATCGATCTG ATGCTCCTCT TGAGCCTGTA GGTATTATTT CTATTGAAGT TTTGTGA
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| Protein sequence | MTTVIMHTSE GDIKINLFDS KAPETVKNFV GLATGEREWL DSFSGKPSHE PFYDGLTFHR
IIKDFMIQGG CPLGNGTGGP GYEFDDEIDA SLKFDKPYLL AMANAGKRRG RDGRLHGTNG
SQFFITTVPT PWLDGHHTIF GEVADDESKA VVDKLEAVAT DRSDAPLEPV GIISIEVL
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