| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0889 |
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| Symbol | |
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| ID | 8709262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1010930 |
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| End bp | 1011778 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482989 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003374105 |
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| Protein GI | 283783351 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGA TCGAACATCT TCACAAAAGC TACGGCAAAG GTAGCAAAGC GAACGAAGCA
TTACACGACA TTAATCTGAC TATTGAATCG GGAGAAGTAT TCGGAATCCT TGGTTCTTCT
GGTGCAGGAA AGTCTTCGCT AGTTCGTTGC ATGAATCTGC TTGAGCGACC AACTTCCGGC
AAAATTATTA TTGACGGAAA TGATATTAGC GAAGTAAAAG ATAAAGAACT TGCAAAAGTA
CGCACTAATA TTGGCATGAT TTTCCAGAAT TTTAGCCTTT TCCAGCAGCG TACAGTATTG
CGAAACGTCA CTTTCCCATT AGAGCTGAAT CACACTGCAA AAAAGGAACG AGAAGAACGC
GCAAACTACT TACTTGACTT AGTTGGTTTA CAAGATTTTG CAAACCGCTA CCCTAGCCAG
CTTTCAGGCG GACAGCAGCA GCGCGTAGCA ATTGCACGAG CATTGGCGAA TAATCCGTCG
ATTATGCTTT GCGACGAAGC AACAAGCGCA CTTGACTCCA CAACTACTGC GCAAATCCTT
GATTTATTGA GCCGAATTAA CCGCGAACTC AACGTAACGC TTGTTATTAT TACGCATTCG
CTGGCTGTAG CACGAAATAT TTGCGACCGA GTTGCAATGA TTGATGGCGG ACGCATTGTG
GAATTAGGTG ACACTGATAC GCTTTTTGCA AATCCACAAA GCGATATTTT GCGAACTCTT
ATTGCAGATG AAAAACAGGA AAATCATCGC GCTAAAATTA CAAGCACGAT TGCAAGCGAG
CTTAACAATA AGCCAGAAAA CGCACAAACA GACGAACAAA CAAACGCGCT TACCAACGAG
GTGAAATAA
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| Protein sequence | MIQIEHLHKS YGKGSKANEA LHDINLTIES GEVFGILGSS GAGKSSLVRC MNLLERPTSG
KIIIDGNDIS EVKDKELAKV RTNIGMIFQN FSLFQQRTVL RNVTFPLELN HTAKKEREER
ANYLLDLVGL QDFANRYPSQ LSGGQQQRVA IARALANNPS IMLCDEATSA LDSTTTAQIL
DLLSRINREL NVTLVIITHS LAVARNICDR VAMIDGGRIV ELGDTDTLFA NPQSDILRTL
IADEKQENHR AKITSTIASE LNNKPENAQT DEQTNALTNE VK
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