| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0881 |
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| Symbol | |
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| ID | 8709645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 999386 |
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| End bp | 1000783 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482981 |
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| Product | chloride transporter, ClC family |
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| Protein accession | YP_003374097 |
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| Protein GI | 283783343 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC GCAATTTGCA AATAGTAGGC AGTAAAAAAC CTAGTAAGTG TTTGAACTAT
GTTTTTACAT GTTTACGATT AAGTCTTATT GCTTTTTTTG TTGCAGTTAT GGCTGGGGTT
GGTACAATAT TATTAACTCT GTTACTACAT GCTGTGCAAA ACGTAATGTT CGGATTTTCA
GAATCTGCTC TTAAACCTTC GCCAGTTGGA TTGCCAGTAT TGCATTATGT TGCTGTTGTA
TTAATTGTCA TGTCTGTTGC TGCAATTATT TGGATGTGGT TATGGACAAA ATCTTCTAAT
CGTATTGTCG ATATAGCTCA TGCTGTTCGT GGTCAATCAA TGCCATTTAA TACGACGATT
ATCCATGTAT GTTTACAAAT TTTTATAGTT GCTTCTGGCG CAAGTTTAGG TAGGGAAGTT
GCGCCTCGAG AATTGGCTGC AATGCTTACT CAGAAGTTAC TCTGCTTTAT TCGAGTCAGT
GAATTTCAAG CTCGCGTTTT GGTTGCAAGT GCTGCTGGTG CTGGTTTAGC TGGAGTTTAT
CGCGCTCCAA TAGCGGGTGC GATTATGGTG CTAGGTTTGG TTGCAATTCC ACGTTTTTCT
CATGACTCGA AATCTTCTTT AAAGCGTTCG AAATGGTATT GGCTTATACA AAAATTTAGT
ATTTTTGCTA TTGCGTTATG TATAAGTGAA ATTGCATCAT TGACTACTAT TTTTGTGCTT
GGGTATGAGC CTTACTATTG TTTGTCAAGT CTTGATGACA TCCATATTGT CAACACGACT
GCGTTGCTGC TTGCAATTAT AGTTGGCATT GCTTGCGGTA TTGTTGGCAC TCTTTTCCAT
AAGATGATTC ATTGGGCTCG CTCTCAGTGT GCTCACAATT ACCAAATTTT ATATTTTTTG
CCATTAATGG GCTTAGTAAC AGGATTAGTT GCATCATGGA ATCCAGCCAT TATGGGCAAT
GGTCGAGCTT TAGCGCAATA CGCATATAAC ATTGCAAAAA CAAGTATTGC AATTGACAAA
AACTCTTTGG TAACTTTGCT TCTACTGGTT GTTGCAAAAA TAATTTTAAC AAGTTGCACT
CTTCGAGCTG GCGCAAGTGG TGGTGTGCTT CAGCCGAGTA TGTCGTCTGG AGCTTGCGTA
GGGCTGATTA TAGGTTTTAT AAGTATGAAC ATTCCAGTTG TTGGTGGCAT GTTATCAAGT
CAGCCCAAAA TATTGGTAAT AGCTGCTATT TTTGGTGCTG CAAGTCTGCT AACTGCAAGT
CGAAAGTCAT TGTGGTTTGC GCTTTTTTTG GTAGCACAAT TAGTGAATTT GCCTATGATT
ATGATTATTC CAATGGTTGT TTCTTGTGCT GTATCTAGAA GCATAACGAT GATACCAAAA
ATTTTTAGCC GCAAATAA
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| Protein sequence | MEKRNLQIVG SKKPSKCLNY VFTCLRLSLI AFFVAVMAGV GTILLTLLLH AVQNVMFGFS
ESALKPSPVG LPVLHYVAVV LIVMSVAAII WMWLWTKSSN RIVDIAHAVR GQSMPFNTTI
IHVCLQIFIV ASGASLGREV APRELAAMLT QKLLCFIRVS EFQARVLVAS AAGAGLAGVY
RAPIAGAIMV LGLVAIPRFS HDSKSSLKRS KWYWLIQKFS IFAIALCISE IASLTTIFVL
GYEPYYCLSS LDDIHIVNTT ALLLAIIVGI ACGIVGTLFH KMIHWARSQC AHNYQILYFL
PLMGLVTGLV ASWNPAIMGN GRALAQYAYN IAKTSIAIDK NSLVTLLLLV VAKIILTSCT
LRAGASGGVL QPSMSSGACV GLIIGFISMN IPVVGGMLSS QPKILVIAAI FGAASLLTAS
RKSLWFALFL VAQLVNLPMI MIIPMVVSCA VSRSITMIPK IFSRK
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