| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0869 |
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| Symbol | |
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| ID | 8709937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 981667 |
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| End bp | 982926 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482969 |
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| Product | putative Na+/H+ antiporter NhaA |
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| Protein accession | YP_003374086 |
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| Protein GI | 283783332 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGAC GCAGTTGGAG AATAGCTTGC AATATTGCAA ATAATGAGCG AATTTCTGGA
TTAATTATGC TTGGTTTTGC TCTTACCGGC CTATTGCTTG CAAACATTCC TTTAACCGCG
CCAATATTTG AAGCCGTATC GCATACTCAT GTAGGCATTC CGTGGACGAA TATACACATG
TCAATTGGTC ACTGGGTGCA AGACGGCGTG CTCACTATTT TCTTCCTGTC AGTTGGCTTA
GATTTAAAAC ACGAACTTAT TGCTGGTTCG CTTTCTGATC CTCGAGCAGC TGCAATGCCA
ATGATTTGTG CTGTTGGCGG AATGATTGTG CCTCCTTTAC TGTTTGTTGC TACAGTAACT
GTATTTTCTG AATTGCATGC CGGGCAGGAG ATTATGCGTC TTACTTCTGG TGCTTTACCT
TCGCTTGATA TGGTTCGTGA CGGGTGGGCA ATACCTACGG CAACAGATAT AGCTTTCTCT
CTTGCTGTTC TTGCTTTATT TGCAAAAACT TTGCCACACG CTTTGCGTGC ATTTCTTATG
ACTCTTGCTA CAGTAGACGA TTTGCTTGGA ATAGCACTTA TTGCTGTGTT CTTCTCATCT
CTTAACGCGT GGTATTGGTT TGCTGGAGTA ATTGCTTGCG GTTTGATTTG GACTACTTTA
GTGCGTTTGA AGCGCGTCCC ATGGCCGTTG GTTGCAATAG TAGGAATTAT GGCTTGGGTT
ATGATGTATG AAGCTGGCGT GCATCCAACT TTAGCTGGAG TGATGGTTGG TTTGCTAACT
CCTGCGCATT TAGTTCATGG CGAAAAAACG CTTCGTGCTG AACGCTATCG CGAAAAAATT
CAGCCTGTTT CTGCGCTACT GGCTCTTCCA ATTTTCGCTC TTTTCGCTAC AGGAGTGCAT
TTTGAAACAT TGACTTGGGA GTTGTTCTTC TCGCCAATTT TGATTGCTAT CACTATTGCT
CTTGTTATTG GTAAACCTGT TGGAATTATG GTAACTGCTT GGATATCAAA GCGTGTTCTA
GGTTTGAAAG TTCCTGATGG TCTTCGCGTA GTAGACTTAA TGCCTACAGC ATGTGCGTGT
GGAATTGGTT TCACTGTTTC TCTTCTTATT GCTTCTCTTG CGTATTCTGA CGCAGATTTG
TCTGCTGAAG CACGTTTTGG CGTTCTTGTT GCTTCTATTG TTGCTGCAGG AGTTTCTGGC
TTCTTACTTT CTATGCAAGC AAAGCATATG GAAGAAGAAT TAGATGAGGT TGAAGAATAG
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| Protein sequence | MIRRSWRIAC NIANNERISG LIMLGFALTG LLLANIPLTA PIFEAVSHTH VGIPWTNIHM
SIGHWVQDGV LTIFFLSVGL DLKHELIAGS LSDPRAAAMP MICAVGGMIV PPLLFVATVT
VFSELHAGQE IMRLTSGALP SLDMVRDGWA IPTATDIAFS LAVLALFAKT LPHALRAFLM
TLATVDDLLG IALIAVFFSS LNAWYWFAGV IACGLIWTTL VRLKRVPWPL VAIVGIMAWV
MMYEAGVHPT LAGVMVGLLT PAHLVHGEKT LRAERYREKI QPVSALLALP IFALFATGVH
FETLTWELFF SPILIAITIA LVIGKPVGIM VTAWISKRVL GLKVPDGLRV VDLMPTACAC
GIGFTVSLLI ASLAYSDADL SAEARFGVLV ASIVAAGVSG FLLSMQAKHM EEELDEVEE
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