| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0859 |
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| Symbol | |
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| ID | 8709097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 970826 |
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| End bp | 971449 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646482959 |
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| Product | ribosomal protein L25, Ctc-form |
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| Protein accession | YP_003374076 |
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| Protein GI | 283783322 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAA AAATTACTCT TGAAGGCGAA TTGCGCACTG AGTTTGGTAA GGGTGTTGCT
CGTCGTTTGC GCGTAGCTAA GCTGATTCCA GCAAGCCTTT ATGCTGGCGG TGCTGAACCA
GTGCATGTTA CTCTTCCAAT GCGCGAAACC ACTTTGGCTT TGCGTCACGC TAATGCTTTG
TTCACTATTA AGTTTGGCAA GGAATCTCGC ATTGCAGTTG TTAAGGATGT TCAGCGTAAC
CCTGTTAAGC GCATTGTAGA ACACATTGAC TTCTACGAAG TTAAGGCTGG CGAAAAGATT
GACGTTGAAG TTCCAGTCTT CGTTGAAGGC ACTCCAAAGG GTGCTGCAGT TGCATTCGTG
GATGTCCAGG AGCTCAAGGT TCGCGCAGAC GTTGCTAACT TGCCAGAGCG TTTGGTTGTT
AACGTTGATG GTTTGACCGA CGGCATCAAG GTGTTTGCTA AGGATGTCAA GCTTCCTGAG
GGTGTTGAGC TCGATATGGA TGGCGAAGAA TCCGTTGTGA GCGTCACTGT TCCTGAAGAT
GCTGCTACAG CCGAAGCTGC TGCTCCTGCT GCAGATGCTG CTGCCGCCGC TCCAGCTGCT
GCTCCTGCTG CAGAAGAAAA GTAA
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| Protein sequence | MATKITLEGE LRTEFGKGVA RRLRVAKLIP ASLYAGGAEP VHVTLPMRET TLALRHANAL
FTIKFGKESR IAVVKDVQRN PVKRIVEHID FYEVKAGEKI DVEVPVFVEG TPKGAAVAFV
DVQELKVRAD VANLPERLVV NVDGLTDGIK VFAKDVKLPE GVELDMDGEE SVVSVTVPED
AATAEAAAPA ADAAAAAPAA APAAEEK
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